Protein–RNA interactions for Protein: O75427

LRCH4, Leucine-rich repeat and calponin homology domain-containing protein 4, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4O75427 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
LRCH4O75427 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LRCH4O75427 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC20.59■□□□□ 0.89
LRCH4O75427 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC20.59■□□□□ 0.89
LRCH4O75427 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LRCH4O75427 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LRCH4O75427 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
LRCH4O75427 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC20.59■□□□□ 0.89
LRCH4O75427 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC20.59■□□□□ 0.89
LRCH4O75427 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
LRCH4O75427 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LRCH4O75427 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LRCH4O75427 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
LRCH4O75427 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LRCH4O75427 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LRCH4O75427 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC20.59■□□□□ 0.89
LRCH4O75427 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.59■□□□□ 0.89
LRCH4O75427 AC007952.6-201ENST00000573168 2673 ntBASIC20.59■□□□□ 0.89
LRCH4O75427 AC003957.1-201ENST00000625108 2673 ntBASIC20.59■□□□□ 0.89
LRCH4O75427 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
LRCH4O75427 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC20.58■□□□□ 0.89
LRCH4O75427 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
LRCH4O75427 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.89
LRCH4O75427 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
LRCH4O75427 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
LRCH4O75427 AL355802.2-201ENST00000402069 882 ntBASIC20.58■□□□□ 0.89
LRCH4O75427 REXO2-208ENST00000539754 791 ntTSL 2 BASIC20.58■□□□□ 0.89
LRCH4O75427 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC20.58■□□□□ 0.89
LRCH4O75427 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC20.58■□□□□ 0.89
LRCH4O75427 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC20.58■□□□□ 0.89
LRCH4O75427 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC20.58■□□□□ 0.89
LRCH4O75427 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC20.58■□□□□ 0.89
LRCH4O75427 TFP1-202ENST00000475455 1573 ntBASIC20.58■□□□□ 0.88
LRCH4O75427 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
LRCH4O75427 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
LRCH4O75427 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
LRCH4O75427 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
LRCH4O75427 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
LRCH4O75427 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
LRCH4O75427 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LRCH4O75427 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LRCH4O75427 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC20.57■□□□□ 0.88
LRCH4O75427 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC20.57■□□□□ 0.88
LRCH4O75427 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LRCH4O75427 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
LRCH4O75427 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
LRCH4O75427 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
LRCH4O75427 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
LRCH4O75427 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC20.57■□□□□ 0.88
LRCH4O75427 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC20.57■□□□□ 0.88
LRCH4O75427 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC20.57■□□□□ 0.88
LRCH4O75427 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
LRCH4O75427 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC20.57■□□□□ 0.88
LRCH4O75427 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
LRCH4O75427 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
LRCH4O75427 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
LRCH4O75427 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
LRCH4O75427 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LRCH4O75427 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LRCH4O75427 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
LRCH4O75427 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC20.56■□□□□ 0.88
LRCH4O75427 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
LRCH4O75427 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
LRCH4O75427 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
LRCH4O75427 RPS2P52-201ENST00000469610 820 ntBASIC20.56■□□□□ 0.88
LRCH4O75427 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC20.56■□□□□ 0.88
LRCH4O75427 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC20.56■□□□□ 0.88
LRCH4O75427 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC20.56■□□□□ 0.88
LRCH4O75427 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC20.56■□□□□ 0.88
LRCH4O75427 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LRCH4O75427 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC20.56■□□□□ 0.88
LRCH4O75427 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC20.56■□□□□ 0.88
LRCH4O75427 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
LRCH4O75427 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC20.56■□□□□ 0.88
LRCH4O75427 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
LRCH4O75427 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC20.55■□□□□ 0.88
LRCH4O75427 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LRCH4O75427 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.55■□□□□ 0.88
LRCH4O75427 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
LRCH4O75427 AC093484.2-201ENST00000580996 2166 ntBASIC20.55■□□□□ 0.88
LRCH4O75427 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC20.55■□□□□ 0.88
LRCH4O75427 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LRCH4O75427 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
LRCH4O75427 ID1-201ENST00000376105 1233 ntBASIC20.55■□□□□ 0.88
LRCH4O75427 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC20.55■□□□□ 0.88
LRCH4O75427 RGMA-211ENST00000557420 989 ntTSL 3 BASIC20.55■□□□□ 0.88
LRCH4O75427 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
LRCH4O75427 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LRCH4O75427 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LRCH4O75427 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LRCH4O75427 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LRCH4O75427 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC20.55■□□□□ 0.88
LRCH4O75427 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LRCH4O75427 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC20.54■□□□□ 0.88
LRCH4O75427 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
LRCH4O75427 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
LRCH4O75427 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC20.54■□□□□ 0.88
LRCH4O75427 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC20.54■□□□□ 0.88
LRCH4O75427 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC20.54■□□□□ 0.88
LRCH4O75427 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms