Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
SSX4O60224 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SSX4O60224 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SSX4O60224 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SSX4O60224 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC17.86■□□□□ 0.45
SSX4O60224 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
SSX4O60224 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC17.86■□□□□ 0.45
SSX4O60224 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SSX4O60224 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC17.86■□□□□ 0.45
SSX4O60224 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SSX4O60224 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SSX4O60224 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
SSX4O60224 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC17.86■□□□□ 0.45
SSX4O60224 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC17.85■□□□□ 0.45
SSX4O60224 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC17.85■□□□□ 0.45
SSX4O60224 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SSX4O60224 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
SSX4O60224 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SSX4O60224 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SSX4O60224 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
SSX4O60224 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SSX4O60224 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SSX4O60224 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SSX4O60224 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SSX4O60224 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
SSX4O60224 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
SSX4O60224 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SSX4O60224 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.85■□□□□ 0.45
SSX4O60224 AC073210.2-201ENST00000430369 194 ntBASIC17.85■□□□□ 0.45
SSX4O60224 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC17.85■□□□□ 0.45
SSX4O60224 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC17.85■□□□□ 0.45
SSX4O60224 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC17.85■□□□□ 0.45
SSX4O60224 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
SSX4O60224 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
SSX4O60224 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SSX4O60224 ADK-206ENST00000541550 2222 ntTSL 2 BASIC17.85■□□□□ 0.45
SSX4O60224 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC17.85■□□□□ 0.45
SSX4O60224 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC17.85■□□□□ 0.45
SSX4O60224 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC17.85■□□□□ 0.45
SSX4O60224 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SSX4O60224 AC069236.1-201ENST00000604339 616 ntBASIC17.85■□□□□ 0.45
SSX4O60224 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SSX4O60224 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SSX4O60224 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
SSX4O60224 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SSX4O60224 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SSX4O60224 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SSX4O60224 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SSX4O60224 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
SSX4O60224 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SSX4O60224 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SSX4O60224 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SSX4O60224 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC17.84■□□□□ 0.45
SSX4O60224 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
SSX4O60224 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SSX4O60224 MIPEPP3-201ENST00000412105 444 ntBASIC17.84■□□□□ 0.45
SSX4O60224 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
SSX4O60224 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SSX4O60224 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC17.84■□□□□ 0.45
SSX4O60224 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC17.84■□□□□ 0.45
SSX4O60224 FP700111.2-201ENST00000619190 1892 ntBASIC17.84■□□□□ 0.45
SSX4O60224 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SSX4O60224 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
SSX4O60224 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
SSX4O60224 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SSX4O60224 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SSX4O60224 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SSX4O60224 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SSX4O60224 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC17.83■□□□□ 0.45
SSX4O60224 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SSX4O60224 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SSX4O60224 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC17.83■□□□□ 0.44
SSX4O60224 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC17.83■□□□□ 0.44
SSX4O60224 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
SSX4O60224 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SSX4O60224 AC007322.4-201ENST00000509611 723 ntBASIC17.83■□□□□ 0.44
SSX4O60224 RNA5SP413-201ENST00000516373 109 ntBASIC17.83■□□□□ 0.44
SSX4O60224 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC17.83■□□□□ 0.44
SSX4O60224 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC17.83■□□□□ 0.44
SSX4O60224 AC016405.3-201ENST00000607710 860 ntBASIC17.83■□□□□ 0.44
SSX4O60224 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SSX4O60224 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
SSX4O60224 OR10C1-204ENST00000622521 1039 ntBASIC17.83■□□□□ 0.44
SSX4O60224 AC066615.1-201ENST00000640911 628 ntBASIC17.83■□□□□ 0.44
SSX4O60224 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
SSX4O60224 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC17.83■□□□□ 0.44
SSX4O60224 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
SSX4O60224 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
SSX4O60224 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SSX4O60224 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC17.83■□□□□ 0.44
SSX4O60224 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SSX4O60224 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SSX4O60224 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SSX4O60224 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SSX4O60224 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC17.83■□□□□ 0.44
SSX4O60224 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SSX4O60224 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC17.82■□□□□ 0.44
SSX4O60224 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
SSX4O60224 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.82■□□□□ 0.44
SSX4O60224 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms