Protein–RNA interactions for Protein: O43900

PRICKLE3, Prickle planar cell polarity protein 3, humanhuman

Predicted RBP Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE3O43900 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PRICKLE3O43900 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
PRICKLE3O43900 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC19.01■□□□□ 0.63
PRICKLE3O43900 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PRICKLE3O43900 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
PRICKLE3O43900 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
PRICKLE3O43900 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PRICKLE3O43900 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
PRICKLE3O43900 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC19.01■□□□□ 0.63
PRICKLE3O43900 AC093827.2-201ENST00000512654 315 ntBASIC19.01■□□□□ 0.63
PRICKLE3O43900 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC19.01■□□□□ 0.63
PRICKLE3O43900 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC19.01■□□□□ 0.63
PRICKLE3O43900 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PRICKLE3O43900 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PRICKLE3O43900 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC19.01■□□□□ 0.63
PRICKLE3O43900 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PRICKLE3O43900 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
PRICKLE3O43900 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PRICKLE3O43900 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PRICKLE3O43900 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PRICKLE3O43900 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
PRICKLE3O43900 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PRICKLE3O43900 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
PRICKLE3O43900 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC19■□□□□ 0.63
PRICKLE3O43900 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PRICKLE3O43900 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
PRICKLE3O43900 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
PRICKLE3O43900 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC19■□□□□ 0.63
PRICKLE3O43900 KRASP1-201ENST00000407852 552 ntBASIC19■□□□□ 0.63
PRICKLE3O43900 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC19■□□□□ 0.63
PRICKLE3O43900 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC19■□□□□ 0.63
PRICKLE3O43900 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC19■□□□□ 0.63
PRICKLE3O43900 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC19■□□□□ 0.63
PRICKLE3O43900 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
PRICKLE3O43900 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
PRICKLE3O43900 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PRICKLE3O43900 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
PRICKLE3O43900 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
PRICKLE3O43900 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC19■□□□□ 0.63
PRICKLE3O43900 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PRICKLE3O43900 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PRICKLE3O43900 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC19■□□□□ 0.63
PRICKLE3O43900 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC19■□□□□ 0.63
PRICKLE3O43900 TMEM179-206ENST00000616017 1645 ntBASIC19■□□□□ 0.63
PRICKLE3O43900 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PRICKLE3O43900 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PRICKLE3O43900 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC19■□□□□ 0.63
PRICKLE3O43900 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC19■□□□□ 0.63
PRICKLE3O43900 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC19■□□□□ 0.63
PRICKLE3O43900 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PRICKLE3O43900 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
PRICKLE3O43900 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PRICKLE3O43900 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
PRICKLE3O43900 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PRICKLE3O43900 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PRICKLE3O43900 NBPF21P-201ENST00000425093 1451 ntBASIC18.99■□□□□ 0.63
PRICKLE3O43900 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.99■□□□□ 0.63
PRICKLE3O43900 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC18.99■□□□□ 0.63
PRICKLE3O43900 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PRICKLE3O43900 AC239809.2-201ENST00000415381 517 ntBASIC18.99■□□□□ 0.63
PRICKLE3O43900 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC18.99■□□□□ 0.63
PRICKLE3O43900 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
PRICKLE3O43900 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC18.99■□□□□ 0.63
PRICKLE3O43900 DET1-205ENST00000558413 583 ntTSL 4 BASIC18.99■□□□□ 0.63
PRICKLE3O43900 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC18.99■□□□□ 0.63
PRICKLE3O43900 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC18.99■□□□□ 0.63
PRICKLE3O43900 AC110285.5-201ENST00000611501 352 ntBASIC18.99■□□□□ 0.63
PRICKLE3O43900 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.99■□□□□ 0.63
PRICKLE3O43900 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PRICKLE3O43900 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
PRICKLE3O43900 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PRICKLE3O43900 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC18.98■□□□□ 0.63
PRICKLE3O43900 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC18.98■□□□□ 0.63
PRICKLE3O43900 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
PRICKLE3O43900 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
PRICKLE3O43900 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PRICKLE3O43900 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PRICKLE3O43900 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
PRICKLE3O43900 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC18.98■□□□□ 0.63
PRICKLE3O43900 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PRICKLE3O43900 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PRICKLE3O43900 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC18.98■□□□□ 0.63
PRICKLE3O43900 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PRICKLE3O43900 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
PRICKLE3O43900 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PRICKLE3O43900 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC18.98■□□□□ 0.63
PRICKLE3O43900 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PRICKLE3O43900 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PRICKLE3O43900 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
PRICKLE3O43900 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
PRICKLE3O43900 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.98■□□□□ 0.63
PRICKLE3O43900 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
PRICKLE3O43900 AP006587.1-201ENST00000534129 1502 ntBASIC18.98■□□□□ 0.63
PRICKLE3O43900 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PRICKLE3O43900 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PRICKLE3O43900 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PRICKLE3O43900 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PRICKLE3O43900 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.98■□□□□ 0.63
PRICKLE3O43900 LBX2-AS1-202ENST00000603175 2083 ntBASIC18.97■□□□□ 0.63
PRICKLE3O43900 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms