Protein–RNA interactions for Protein: O15260

SURF4, Surfeit locus protein 4, humanhuman

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SURF4O15260 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SURF4O15260 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
SURF4O15260 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SURF4O15260 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SURF4O15260 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
SURF4O15260 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SURF4O15260 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
SURF4O15260 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC17.83■□□□□ 0.45
SURF4O15260 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
SURF4O15260 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC17.83■□□□□ 0.45
SURF4O15260 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
SURF4O15260 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SURF4O15260 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SURF4O15260 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
SURF4O15260 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SURF4O15260 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
SURF4O15260 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
SURF4O15260 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
SURF4O15260 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC17.83■□□□□ 0.44
SURF4O15260 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC17.83■□□□□ 0.44
SURF4O15260 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC17.83■□□□□ 0.44
SURF4O15260 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SURF4O15260 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
SURF4O15260 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC17.83■□□□□ 0.44
SURF4O15260 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SURF4O15260 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC17.83■□□□□ 0.44
SURF4O15260 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SURF4O15260 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
SURF4O15260 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SURF4O15260 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SURF4O15260 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SURF4O15260 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SURF4O15260 AC093503.3-201ENST00000624917 2352 ntBASIC17.82■□□□□ 0.44
SURF4O15260 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SURF4O15260 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SURF4O15260 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
SURF4O15260 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
SURF4O15260 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
SURF4O15260 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SURF4O15260 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SURF4O15260 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
SURF4O15260 MCRIP2P1-201ENST00000394346 511 ntBASIC17.82■□□□□ 0.44
SURF4O15260 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
SURF4O15260 AC006015.1-201ENST00000429970 570 ntBASIC17.82■□□□□ 0.44
SURF4O15260 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SURF4O15260 SPI1-203ENST00000533030 661 ntTSL 2 BASIC17.82■□□□□ 0.44
SURF4O15260 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC17.82■□□□□ 0.44
SURF4O15260 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
SURF4O15260 AC100791.3-201ENST00000617619 330 ntBASIC17.82■□□□□ 0.44
SURF4O15260 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
SURF4O15260 AC013268.1-206ENST00000638368 961 ntBASIC17.82■□□□□ 0.44
SURF4O15260 AC112229.1-201ENST00000639295 961 ntBASIC17.82■□□□□ 0.44
SURF4O15260 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC17.82■□□□□ 0.44
SURF4O15260 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
SURF4O15260 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SURF4O15260 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
SURF4O15260 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC17.82■□□□□ 0.44
SURF4O15260 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC17.82■□□□□ 0.44
SURF4O15260 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC17.82■□□□□ 0.44
SURF4O15260 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SURF4O15260 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SURF4O15260 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
SURF4O15260 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SURF4O15260 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SURF4O15260 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SURF4O15260 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SURF4O15260 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC17.81■□□□□ 0.44
SURF4O15260 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC17.81■□□□□ 0.44
SURF4O15260 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC17.81■□□□□ 0.44
SURF4O15260 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC17.81■□□□□ 0.44
SURF4O15260 PLLP-204ENST00000569059 665 ntTSL 3 BASIC17.81■□□□□ 0.44
SURF4O15260 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
SURF4O15260 BID-214ENST00000617586 542 ntTSL 5 BASIC17.81■□□□□ 0.44
SURF4O15260 WWOX-218ENST00000627394 894 ntTSL 5 BASIC17.81■□□□□ 0.44
SURF4O15260 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SURF4O15260 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SURF4O15260 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC17.81■□□□□ 0.44
SURF4O15260 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SURF4O15260 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC17.81■□□□□ 0.44
SURF4O15260 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SURF4O15260 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
SURF4O15260 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC17.81■□□□□ 0.44
SURF4O15260 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
SURF4O15260 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SURF4O15260 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SURF4O15260 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC17.81■□□□□ 0.44
SURF4O15260 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
SURF4O15260 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SURF4O15260 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SURF4O15260 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
SURF4O15260 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC17.8■□□□□ 0.44
SURF4O15260 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
SURF4O15260 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
SURF4O15260 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SURF4O15260 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
SURF4O15260 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SURF4O15260 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SURF4O15260 ME3-201ENST00000323418 1068 ntTSL 5 BASIC17.8■□□□□ 0.44
SURF4O15260 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SURF4O15260 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms