Protein–RNA interactions for Protein: O15050

TRANK1, TPR and ankyrin repeat-containing protein 1, humanhuman

Predictions only

Length 2,925 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRANK1O15050 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TRANK1O15050 AC004951.3-201ENST00000418645 1148 ntBASIC20.91■□□□□ 0.94
TRANK1O15050 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC20.91■□□□□ 0.94
TRANK1O15050 VENTXP5-201ENST00000523979 775 ntBASIC20.91■□□□□ 0.94
TRANK1O15050 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC20.91■□□□□ 0.94
TRANK1O15050 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC20.91■□□□□ 0.94
TRANK1O15050 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TRANK1O15050 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TRANK1O15050 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TRANK1O15050 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
TRANK1O15050 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TRANK1O15050 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
TRANK1O15050 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TRANK1O15050 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TRANK1O15050 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TRANK1O15050 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TRANK1O15050 HYMAI.1-201ENST00000620949 238 ntBASIC20.91■□□□□ 0.94
TRANK1O15050 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC20.91■□□□□ 0.94
TRANK1O15050 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.91■□□□□ 0.94
TRANK1O15050 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC20.9■□□□□ 0.94
TRANK1O15050 AC005229.4-201ENST00000610085 2198 ntBASIC20.9■□□□□ 0.94
TRANK1O15050 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TRANK1O15050 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC20.9■□□□□ 0.94
TRANK1O15050 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC20.9■□□□□ 0.94
TRANK1O15050 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TRANK1O15050 ETFA-216ENST00000560726 942 ntTSL 3 BASIC20.9■□□□□ 0.94
TRANK1O15050 DFFB-212ENST00000625756 649 ntTSL 5 BASIC20.9■□□□□ 0.94
TRANK1O15050 AC141257.4-201ENST00000634557 245 ntBASIC20.9■□□□□ 0.94
TRANK1O15050 AC136944.6-201ENST00000634818 245 ntBASIC20.9■□□□□ 0.94
TRANK1O15050 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRANK1O15050 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRANK1O15050 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TRANK1O15050 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRANK1O15050 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
TRANK1O15050 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC20.9■□□□□ 0.94
TRANK1O15050 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TRANK1O15050 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.9■□□□□ 0.94
TRANK1O15050 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC20.9■□□□□ 0.94
TRANK1O15050 AC008040.2-201ENST00000461049 708 ntBASIC20.9■□□□□ 0.94
TRANK1O15050 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC20.9■□□□□ 0.94
TRANK1O15050 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TRANK1O15050 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TRANK1O15050 AL691432.3-201ENST00000621860 400 ntBASIC20.9■□□□□ 0.94
TRANK1O15050 AC116562.4-202ENST00000641738 218 ntBASIC20.9■□□□□ 0.94
TRANK1O15050 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC20.89■□□□□ 0.94
TRANK1O15050 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
TRANK1O15050 HOMER2P1-201ENST00000455653 964 ntBASIC20.89■□□□□ 0.94
TRANK1O15050 Z85996.1-201ENST00000494644 937 ntBASIC20.89■□□□□ 0.94
TRANK1O15050 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
TRANK1O15050 AL441883.1-201ENST00000566170 1045 ntBASIC20.89■□□□□ 0.94
TRANK1O15050 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
TRANK1O15050 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TRANK1O15050 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.89■□□□□ 0.93
TRANK1O15050 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRANK1O15050 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRANK1O15050 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRANK1O15050 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC20.89■□□□□ 0.93
TRANK1O15050 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC20.89■□□□□ 0.93
TRANK1O15050 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC20.89■□□□□ 0.93
TRANK1O15050 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TRANK1O15050 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRANK1O15050 KRT17P6-201ENST00000453795 1220 ntBASIC20.89■□□□□ 0.93
TRANK1O15050 KRT18P16-201ENST00000510337 1294 ntBASIC20.89■□□□□ 0.93
TRANK1O15050 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC20.89■□□□□ 0.93
TRANK1O15050 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRANK1O15050 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TRANK1O15050 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.89■□□□□ 0.93
TRANK1O15050 TFP1-202ENST00000475455 1573 ntBASIC20.89■□□□□ 0.93
TRANK1O15050 AC018553.1-201ENST00000616682 1458 ntBASIC20.89■□□□□ 0.93
TRANK1O15050 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TRANK1O15050 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20.89■□□□□ 0.93
TRANK1O15050 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TRANK1O15050 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC20.88■□□□□ 0.93
TRANK1O15050 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC20.88■□□□□ 0.93
TRANK1O15050 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TRANK1O15050 CR769767.2-201ENST00000622735 460 ntBASIC20.88■□□□□ 0.93
TRANK1O15050 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TRANK1O15050 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
TRANK1O15050 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TRANK1O15050 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC20.88■□□□□ 0.93
TRANK1O15050 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TRANK1O15050 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRANK1O15050 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
TRANK1O15050 AL024507.2-201ENST00000606070 2574 ntBASIC20.88■□□□□ 0.93
TRANK1O15050 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRANK1O15050 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
TRANK1O15050 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC20.88■□□□□ 0.93
TRANK1O15050 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
TRANK1O15050 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRANK1O15050 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TRANK1O15050 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
TRANK1O15050 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC20.88■□□□□ 0.93
TRANK1O15050 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TRANK1O15050 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRANK1O15050 GUSBP5-202ENST00000510805 1989 ntBASIC20.88■□□□□ 0.93
TRANK1O15050 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TRANK1O15050 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC20.88■□□□□ 0.93
TRANK1O15050 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRANK1O15050 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRANK1O15050 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms