Protein–RNA interactions for Protein: B2RNN3

C1QTNF9B, Complement C1q and tumor necrosis factor-related protein 9B, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF9BB2RNN3 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
C1QTNF9BB2RNN3 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
C1QTNF9BB2RNN3 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
C1QTNF9BB2RNN3 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC18.64■□□□□ 0.57
C1QTNF9BB2RNN3 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
C1QTNF9BB2RNN3 AC008040.2-201ENST00000461049 708 ntBASIC18.64■□□□□ 0.57
C1QTNF9BB2RNN3 AL512604.3-201ENST00000569583 964 ntBASIC18.64■□□□□ 0.57
C1QTNF9BB2RNN3 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC18.64■□□□□ 0.57
C1QTNF9BB2RNN3 AC092329.2-201ENST00000598402 547 ntBASIC18.64■□□□□ 0.57
C1QTNF9BB2RNN3 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
C1QTNF9BB2RNN3 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
C1QTNF9BB2RNN3 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
C1QTNF9BB2RNN3 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
C1QTNF9BB2RNN3 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
C1QTNF9BB2RNN3 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
C1QTNF9BB2RNN3 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
C1QTNF9BB2RNN3 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC18.64■□□□□ 0.57
C1QTNF9BB2RNN3 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
C1QTNF9BB2RNN3 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
C1QTNF9BB2RNN3 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
C1QTNF9BB2RNN3 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
C1QTNF9BB2RNN3 GXYLT1P6-201ENST00000456472 1187 ntBASIC18.63■□□□□ 0.57
C1QTNF9BB2RNN3 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC18.63■□□□□ 0.57
C1QTNF9BB2RNN3 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC18.63■□□□□ 0.57
C1QTNF9BB2RNN3 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC18.63■□□□□ 0.57
C1QTNF9BB2RNN3 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
C1QTNF9BB2RNN3 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
C1QTNF9BB2RNN3 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC18.63■□□□□ 0.57
C1QTNF9BB2RNN3 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
C1QTNF9BB2RNN3 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
C1QTNF9BB2RNN3 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
C1QTNF9BB2RNN3 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
C1QTNF9BB2RNN3 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
C1QTNF9BB2RNN3 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
C1QTNF9BB2RNN3 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
C1QTNF9BB2RNN3 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC18.62■□□□□ 0.57
C1QTNF9BB2RNN3 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
C1QTNF9BB2RNN3 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
C1QTNF9BB2RNN3 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC18.62■□□□□ 0.57
C1QTNF9BB2RNN3 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
C1QTNF9BB2RNN3 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC18.62■□□□□ 0.57
C1QTNF9BB2RNN3 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
C1QTNF9BB2RNN3 AC096733.2-201ENST00000609937 1394 ntBASIC18.62■□□□□ 0.57
C1QTNF9BB2RNN3 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
C1QTNF9BB2RNN3 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC18.62■□□□□ 0.57
C1QTNF9BB2RNN3 RCC2P6-201ENST00000526625 1557 ntBASIC18.62■□□□□ 0.57
C1QTNF9BB2RNN3 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
C1QTNF9BB2RNN3 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
C1QTNF9BB2RNN3 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC18.62■□□□□ 0.57
C1QTNF9BB2RNN3 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
C1QTNF9BB2RNN3 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
C1QTNF9BB2RNN3 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
C1QTNF9BB2RNN3 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
C1QTNF9BB2RNN3 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
C1QTNF9BB2RNN3 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
C1QTNF9BB2RNN3 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
C1QTNF9BB2RNN3 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC18.61■□□□□ 0.57
C1QTNF9BB2RNN3 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
C1QTNF9BB2RNN3 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC18.61■□□□□ 0.57
C1QTNF9BB2RNN3 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
C1QTNF9BB2RNN3 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
C1QTNF9BB2RNN3 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC18.61■□□□□ 0.57
C1QTNF9BB2RNN3 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
C1QTNF9BB2RNN3 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
C1QTNF9BB2RNN3 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
C1QTNF9BB2RNN3 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
C1QTNF9BB2RNN3 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
C1QTNF9BB2RNN3 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC18.6■□□□□ 0.57
C1QTNF9BB2RNN3 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
C1QTNF9BB2RNN3 EXOC3-AS1-202ENST00000623673 1663 ntBASIC18.6■□□□□ 0.57
C1QTNF9BB2RNN3 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
C1QTNF9BB2RNN3 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
C1QTNF9BB2RNN3 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
C1QTNF9BB2RNN3 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
C1QTNF9BB2RNN3 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
C1QTNF9BB2RNN3 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
C1QTNF9BB2RNN3 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
C1QTNF9BB2RNN3 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC18.6■□□□□ 0.57
C1QTNF9BB2RNN3 AL031008.1-201ENST00000619963 541 ntBASIC18.6■□□□□ 0.57
C1QTNF9BB2RNN3 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
C1QTNF9BB2RNN3 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC18.6■□□□□ 0.57
C1QTNF9BB2RNN3 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
C1QTNF9BB2RNN3 COMT-203ENST00000403184 2217 ntTSL 2 BASIC18.59■□□□□ 0.57
C1QTNF9BB2RNN3 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC18.59■□□□□ 0.57
C1QTNF9BB2RNN3 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
C1QTNF9BB2RNN3 LINC01311-201ENST00000565162 1445 ntBASIC18.59■□□□□ 0.57
C1QTNF9BB2RNN3 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
C1QTNF9BB2RNN3 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC18.59■□□□□ 0.57
C1QTNF9BB2RNN3 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
C1QTNF9BB2RNN3 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
C1QTNF9BB2RNN3 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
C1QTNF9BB2RNN3 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
C1QTNF9BB2RNN3 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
C1QTNF9BB2RNN3 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
C1QTNF9BB2RNN3 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
C1QTNF9BB2RNN3 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC18.59■□□□□ 0.57
C1QTNF9BB2RNN3 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC18.59■□□□□ 0.57
C1QTNF9BB2RNN3 AC079776.4-201ENST00000511039 504 ntBASIC18.59■□□□□ 0.57
C1QTNF9BB2RNN3 LY6E-213ENST00000522528 606 ntTSL 3 BASIC18.59■□□□□ 0.57
C1QTNF9BB2RNN3 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms