Protein–RNA interactions for Protein: A0A087WSZ9

TRAV30, T-cell receptor alpha variable 30 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30A0A087WSZ9 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRAV30A0A087WSZ9 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC15.52■□□□□ 0.07
TRAV30A0A087WSZ9 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC15.52■□□□□ 0.07
TRAV30A0A087WSZ9 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC15.52■□□□□ 0.07
TRAV30A0A087WSZ9 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
TRAV30A0A087WSZ9 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV30A0A087WSZ9 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV30A0A087WSZ9 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC15.51■□□□□ 0.07
TRAV30A0A087WSZ9 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC15.51■□□□□ 0.07
TRAV30A0A087WSZ9 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV30A0A087WSZ9 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV30A0A087WSZ9 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV30A0A087WSZ9 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
TRAV30A0A087WSZ9 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV30A0A087WSZ9 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV30A0A087WSZ9 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV30A0A087WSZ9 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV30A0A087WSZ9 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV30A0A087WSZ9 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV30A0A087WSZ9 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC15.51■□□□□ 0.07
TRAV30A0A087WSZ9 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
TRAV30A0A087WSZ9 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC15.51■□□□□ 0.07
TRAV30A0A087WSZ9 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC15.51■□□□□ 0.07
TRAV30A0A087WSZ9 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC15.51■□□□□ 0.07
TRAV30A0A087WSZ9 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC15.51■□□□□ 0.07
TRAV30A0A087WSZ9 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC15.51■□□□□ 0.07
TRAV30A0A087WSZ9 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV30A0A087WSZ9 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC15.51■□□□□ 0.07
TRAV30A0A087WSZ9 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV30A0A087WSZ9 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV30A0A087WSZ9 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV30A0A087WSZ9 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC15.51■□□□□ 0.07
TRAV30A0A087WSZ9 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC15.51■□□□□ 0.07
TRAV30A0A087WSZ9 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV30A0A087WSZ9 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV30A0A087WSZ9 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV30A0A087WSZ9 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV30A0A087WSZ9 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV30A0A087WSZ9 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV30A0A087WSZ9 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV30A0A087WSZ9 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV30A0A087WSZ9 PTBP1P-201ENST00000554374 1601 ntBASIC15.5■□□□□ 0.07
TRAV30A0A087WSZ9 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV30A0A087WSZ9 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV30A0A087WSZ9 AP001271.2-201ENST00000624018 1556 ntBASIC15.5■□□□□ 0.07
TRAV30A0A087WSZ9 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV30A0A087WSZ9 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
TRAV30A0A087WSZ9 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC15.5■□□□□ 0.07
TRAV30A0A087WSZ9 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
TRAV30A0A087WSZ9 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV30A0A087WSZ9 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV30A0A087WSZ9 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV30A0A087WSZ9 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC15.5■□□□□ 0.07
TRAV30A0A087WSZ9 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC15.5■□□□□ 0.07
TRAV30A0A087WSZ9 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC15.5■□□□□ 0.07
TRAV30A0A087WSZ9 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV30A0A087WSZ9 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC15.5■□□□□ 0.07
TRAV30A0A087WSZ9 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV30A0A087WSZ9 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV30A0A087WSZ9 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC15.5■□□□□ 0.07
TRAV30A0A087WSZ9 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
TRAV30A0A087WSZ9 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC15.5■□□□□ 0.07
TRAV30A0A087WSZ9 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV30A0A087WSZ9 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV30A0A087WSZ9 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV30A0A087WSZ9 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV30A0A087WSZ9 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV30A0A087WSZ9 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV30A0A087WSZ9 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV30A0A087WSZ9 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV30A0A087WSZ9 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV30A0A087WSZ9 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC15.49■□□□□ 0.07
TRAV30A0A087WSZ9 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV30A0A087WSZ9 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV30A0A087WSZ9 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV30A0A087WSZ9 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV30A0A087WSZ9 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV30A0A087WSZ9 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
TRAV30A0A087WSZ9 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV30A0A087WSZ9 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC15.49■□□□□ 0.07
TRAV30A0A087WSZ9 CYP2T1P-201ENST00000432607 1285 ntBASIC15.49■□□□□ 0.07
TRAV30A0A087WSZ9 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC15.49■□□□□ 0.07
TRAV30A0A087WSZ9 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC15.49■□□□□ 0.07
TRAV30A0A087WSZ9 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV30A0A087WSZ9 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
TRAV30A0A087WSZ9 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV30A0A087WSZ9 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC15.49■□□□□ 0.07
TRAV30A0A087WSZ9 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC15.49■□□□□ 0.07
TRAV30A0A087WSZ9 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
TRAV30A0A087WSZ9 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV30A0A087WSZ9 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV30A0A087WSZ9 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC15.48■□□□□ 0.07
TRAV30A0A087WSZ9 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV30A0A087WSZ9 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV30A0A087WSZ9 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV30A0A087WSZ9 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC15.48■□□□□ 0.07
TRAV30A0A087WSZ9 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV30A0A087WSZ9 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV30A0A087WSZ9 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV30A0A087WSZ9 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms