Protein–RNA interactions for Protein: A0A075B6T8

TRAV9-1, T-cell receptor alpha variable 9-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV9-1A0A075B6T8 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV9-1A0A075B6T8 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV9-1A0A075B6T8 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
TRAV9-1A0A075B6T8 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC14.84□□□□□ -0.03
TRAV9-1A0A075B6T8 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC14.84□□□□□ -0.03
TRAV9-1A0A075B6T8 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
TRAV9-1A0A075B6T8 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
TRAV9-1A0A075B6T8 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.03
TRAV9-1A0A075B6T8 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
TRAV9-1A0A075B6T8 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC14.83□□□□□ -0.03
TRAV9-1A0A075B6T8 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRAV9-1A0A075B6T8 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TRAV9-1A0A075B6T8 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC14.83□□□□□ -0.04
TRAV9-1A0A075B6T8 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TRAV9-1A0A075B6T8 BEX3-202ENST00000372634 753 ntTSL 2 BASIC14.83□□□□□ -0.04
TRAV9-1A0A075B6T8 CD72-202ENST00000378430 585 ntTSL 3 BASIC14.83□□□□□ -0.04
TRAV9-1A0A075B6T8 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
TRAV9-1A0A075B6T8 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
TRAV9-1A0A075B6T8 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRAV9-1A0A075B6T8 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
TRAV9-1A0A075B6T8 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRAV9-1A0A075B6T8 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TRAV9-1A0A075B6T8 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC14.83□□□□□ -0.04
TRAV9-1A0A075B6T8 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
TRAV9-1A0A075B6T8 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC14.83□□□□□ -0.04
TRAV9-1A0A075B6T8 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC14.83□□□□□ -0.04
TRAV9-1A0A075B6T8 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRAV9-1A0A075B6T8 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC14.83□□□□□ -0.04
TRAV9-1A0A075B6T8 AC009237.3-201ENST00000393279 1427 ntBASIC14.83□□□□□ -0.04
TRAV9-1A0A075B6T8 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TRAV9-1A0A075B6T8 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC14.83□□□□□ -0.04
TRAV9-1A0A075B6T8 AL161938.1-201ENST00000569833 2180 ntBASIC14.83□□□□□ -0.04
TRAV9-1A0A075B6T8 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRAV9-1A0A075B6T8 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV9-1A0A075B6T8 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC14.82□□□□□ -0.04
TRAV9-1A0A075B6T8 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC14.82□□□□□ -0.04
TRAV9-1A0A075B6T8 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV9-1A0A075B6T8 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV9-1A0A075B6T8 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV9-1A0A075B6T8 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC14.82□□□□□ -0.04
TRAV9-1A0A075B6T8 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV9-1A0A075B6T8 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC14.82□□□□□ -0.04
TRAV9-1A0A075B6T8 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV9-1A0A075B6T8 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV9-1A0A075B6T8 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV9-1A0A075B6T8 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV9-1A0A075B6T8 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV9-1A0A075B6T8 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV9-1A0A075B6T8 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
TRAV9-1A0A075B6T8 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV9-1A0A075B6T8 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV9-1A0A075B6T8 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV9-1A0A075B6T8 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV9-1A0A075B6T8 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV9-1A0A075B6T8 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
TRAV9-1A0A075B6T8 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC14.82□□□□□ -0.04
TRAV9-1A0A075B6T8 TK2-216ENST00000564917 1156 ntTSL 3 BASIC14.82□□□□□ -0.04
TRAV9-1A0A075B6T8 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV9-1A0A075B6T8 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC14.82□□□□□ -0.04
TRAV9-1A0A075B6T8 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV9-1A0A075B6T8 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV9-1A0A075B6T8 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV9-1A0A075B6T8 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC14.82□□□□□ -0.04
TRAV9-1A0A075B6T8 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV9-1A0A075B6T8 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC14.82□□□□□ -0.04
TRAV9-1A0A075B6T8 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC14.82□□□□□ -0.04
TRAV9-1A0A075B6T8 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV9-1A0A075B6T8 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV9-1A0A075B6T8 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV9-1A0A075B6T8 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV9-1A0A075B6T8 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV9-1A0A075B6T8 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV9-1A0A075B6T8 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV9-1A0A075B6T8 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV9-1A0A075B6T8 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
TRAV9-1A0A075B6T8 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV9-1A0A075B6T8 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC14.81□□□□□ -0.04
TRAV9-1A0A075B6T8 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
TRAV9-1A0A075B6T8 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC14.81□□□□□ -0.04
TRAV9-1A0A075B6T8 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV9-1A0A075B6T8 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV9-1A0A075B6T8 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV9-1A0A075B6T8 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC14.81□□□□□ -0.04
TRAV9-1A0A075B6T8 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC14.81□□□□□ -0.04
TRAV9-1A0A075B6T8 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC14.81□□□□□ -0.04
TRAV9-1A0A075B6T8 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV9-1A0A075B6T8 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV9-1A0A075B6T8 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC14.81□□□□□ -0.04
TRAV9-1A0A075B6T8 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV9-1A0A075B6T8 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC14.81□□□□□ -0.04
TRAV9-1A0A075B6T8 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV9-1A0A075B6T8 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV9-1A0A075B6T8 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV9-1A0A075B6T8 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
TRAV9-1A0A075B6T8 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
TRAV9-1A0A075B6T8 AC010525.1-201ENST00000585559 441 ntBASIC14.81□□□□□ -0.04
TRAV9-1A0A075B6T8 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC14.81□□□□□ -0.04
TRAV9-1A0A075B6T8 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV9-1A0A075B6T8 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV9-1A0A075B6T8 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms