Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC9.76□□□□□ -0.85
SNAPC4Q5SXM2 CSMD2-205ENST00000373381 13698 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
SNAPC4Q5SXM2 UTY-205ENST00000382896 6661 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
SNAPC4Q5SXM2 UTY-211ENST00000540140 6652 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
SNAPC4Q5SXM2 UTY-214ENST00000617789 6682 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
SNAPC4Q5SXM2 GDPD4-202ENST00000376217 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
SNAPC4Q5SXM2 LGSN-202ENST00000370658 5213 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
SNAPC4Q5SXM2 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
SNAPC4Q5SXM2 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC9.75□□□□□ -0.85
SNAPC4Q5SXM2 AC114786.1-201ENST00000512892 1415 ntBASIC9.75□□□□□ -0.85
SNAPC4Q5SXM2 KIAA1217-204ENST00000376454 7381 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
SNAPC4Q5SXM2 BEST3-202ENST00000330891 3532 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
SNAPC4Q5SXM2 RNU1-106P-201ENST00000384382 164 ntBASIC9.75□□□□□ -0.85
SNAPC4Q5SXM2 AC009804.1-201ENST00000400949 179 ntBASIC9.75□□□□□ -0.85
SNAPC4Q5SXM2 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC9.75□□□□□ -0.85
SNAPC4Q5SXM2 RPS26P41-201ENST00000450370 284 ntBASIC9.75□□□□□ -0.85
SNAPC4Q5SXM2 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC9.75□□□□□ -0.85
SNAPC4Q5SXM2 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC9.75□□□□□ -0.85
SNAPC4Q5SXM2 AP000550.3-201ENST00000637734 379 ntBASIC9.75□□□□□ -0.85
SNAPC4Q5SXM2 DNAH10-201ENST00000409039 14473 ntAPPRIS ALT2 TSL 5 BASIC9.75□□□□□ -0.85
SNAPC4Q5SXM2 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC9.75□□□□□ -0.85
SNAPC4Q5SXM2 PKD1L1-201ENST00000289672 9092 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
SNAPC4Q5SXM2 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
SNAPC4Q5SXM2 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
SNAPC4Q5SXM2 AC092807.3-203ENST00000467530 2745 ntTSL 2 BASIC9.75□□□□□ -0.85
SNAPC4Q5SXM2 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC9.75□□□□□ -0.85
SNAPC4Q5SXM2 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC9.75□□□□□ -0.85
SNAPC4Q5SXM2 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC9.75□□□□□ -0.85
SNAPC4Q5SXM2 TRIM66-202ENST00000402157 10086 ntAPPRIS P5 TSL 5 BASIC9.75□□□□□ -0.85
SNAPC4Q5SXM2 MRE11P1-201ENST00000464884 2127 ntBASIC9.75□□□□□ -0.85
SNAPC4Q5SXM2 TGFBR3-202ENST00000370399 4550 ntAPPRIS ALT1 TSL 1 (best) BASIC9.74□□□□□ -0.85
SNAPC4Q5SXM2 GRIN2A-205ENST00000535259 4118 ntTSL 5 BASIC9.74□□□□□ -0.85
SNAPC4Q5SXM2 ZFHX3-201ENST00000268489 16064 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
SNAPC4Q5SXM2 TMCC1-203ENST00000432054 5631 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
SNAPC4Q5SXM2 TBC1D32-201ENST00000275159 4431 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
SNAPC4Q5SXM2 ZNF407-207ENST00000582337 5662 ntTSL 5 BASIC9.74□□□□□ -0.85
SNAPC4Q5SXM2 AL023806.3-201ENST00000638502 2704 ntBASIC9.74□□□□□ -0.85
SNAPC4Q5SXM2 MYO5C-201ENST00000261839 6971 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
SNAPC4Q5SXM2 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
SNAPC4Q5SXM2 FOXP1-212ENST00000491238 2250 ntTSL 2 BASIC9.74□□□□□ -0.85
SNAPC4Q5SXM2 OR2W4P-201ENST00000406496 926 ntBASIC9.74□□□□□ -0.85
SNAPC4Q5SXM2 RN7SKP166-201ENST00000410812 305 ntBASIC9.74□□□□□ -0.85
SNAPC4Q5SXM2 HMGA1P8-201ENST00000414130 321 ntBASIC9.74□□□□□ -0.85
SNAPC4Q5SXM2 SOX9-AS1-202ENST00000414600 742 ntTSL 3 BASIC9.74□□□□□ -0.85
SNAPC4Q5SXM2 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC9.74□□□□□ -0.85
SNAPC4Q5SXM2 CYCSP12-201ENST00000437729 300 ntBASIC9.74□□□□□ -0.85
SNAPC4Q5SXM2 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC9.74□□□□□ -0.85
SNAPC4Q5SXM2 BX284632.1-201ENST00000478218 541 ntBASIC9.74□□□□□ -0.85
SNAPC4Q5SXM2 RNA5SP400-201ENST00000517155 111 ntBASIC9.74□□□□□ -0.85
SNAPC4Q5SXM2 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC9.74□□□□□ -0.85
SNAPC4Q5SXM2 TXNP4-201ENST00000575018 310 ntBASIC9.74□□□□□ -0.85
SNAPC4Q5SXM2 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC9.74□□□□□ -0.85
SNAPC4Q5SXM2 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
SNAPC4Q5SXM2 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
SNAPC4Q5SXM2 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
SNAPC4Q5SXM2 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
SNAPC4Q5SXM2 AFP-201ENST00000226359 1914 ntTSL 5 BASIC9.74□□□□□ -0.85
SNAPC4Q5SXM2 AP001541.1-201ENST00000623322 1904 ntBASIC9.74□□□□□ -0.85
SNAPC4Q5SXM2 MAP3K20-201ENST00000338983 7179 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
SNAPC4Q5SXM2 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
SNAPC4Q5SXM2 AC025263.1-201ENST00000501387 2538 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
SNAPC4Q5SXM2 TRAM2-201ENST00000182527 6908 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
SNAPC4Q5SXM2 PTPRT-206ENST00000373198 12746 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
SNAPC4Q5SXM2 EPHA3-201ENST00000336596 5809 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
SNAPC4Q5SXM2 CSNK2A1-204ENST00000400227 1499 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
SNAPC4Q5SXM2 AP001043.1-202ENST00000380931 5027 ntTSL 2 BASIC9.74□□□□□ -0.85
SNAPC4Q5SXM2 TTC28-208ENST00000612946 11274 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
SNAPC4Q5SXM2 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC9.74□□□□□ -0.85
SNAPC4Q5SXM2 ERCC4-201ENST00000311895 6758 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
SNAPC4Q5SXM2 STON2-206ENST00000555447 4302 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
SNAPC4Q5SXM2 AL591848.4-201ENST00000567832 3472 ntBASIC9.73□□□□□ -0.85
SNAPC4Q5SXM2 TMEM246-203ENST00000374851 5070 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
SNAPC4Q5SXM2 AL589647.1-201ENST00000402485 466 ntBASIC9.73□□□□□ -0.85
SNAPC4Q5SXM2 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC9.73□□□□□ -0.85
SNAPC4Q5SXM2 CYP4F30P-202ENST00000420048 405 ntBASIC9.73□□□□□ -0.85
SNAPC4Q5SXM2 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC9.73□□□□□ -0.85
SNAPC4Q5SXM2 LINC01918-202ENST00000438148 415 ntTSL 3 BASIC9.73□□□□□ -0.85
SNAPC4Q5SXM2 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC9.73□□□□□ -0.85
SNAPC4Q5SXM2 Z80107.2-201ENST00000445127 392 ntBASIC9.73□□□□□ -0.85
SNAPC4Q5SXM2 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC9.73□□□□□ -0.85
SNAPC4Q5SXM2 OR6M2P-201ENST00000529831 871 ntBASIC9.73□□□□□ -0.85
SNAPC4Q5SXM2 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC9.73□□□□□ -0.85
SNAPC4Q5SXM2 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC9.73□□□□□ -0.85
SNAPC4Q5SXM2 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
SNAPC4Q5SXM2 OR6J1-201ENST00000540461 4165 ntAPPRIS P1 BASIC9.73□□□□□ -0.85
SNAPC4Q5SXM2 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC9.73□□□□□ -0.85
SNAPC4Q5SXM2 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
SNAPC4Q5SXM2 ATM-215ENST00000530958 5718 ntTSL 2 BASIC9.73□□□□□ -0.85
SNAPC4Q5SXM2 MID1-201ENST00000317552 6463 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
SNAPC4Q5SXM2 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
SNAPC4Q5SXM2 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC9.73□□□□□ -0.85
SNAPC4Q5SXM2 TMEFF2-203ENST00000409056 3364 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
SNAPC4Q5SXM2 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
SNAPC4Q5SXM2 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC9.73□□□□□ -0.85
SNAPC4Q5SXM2 LARS-212ENST00000510191 3737 ntTSL 2 BASIC9.73□□□□□ -0.85
SNAPC4Q5SXM2 RIF1-205ENST00000444746 7897 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
SNAPC4Q5SXM2 FTO-215ENST00000636491 1676 ntTSL 5 BASIC9.72□□□□□ -0.85
SNAPC4Q5SXM2 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
SNAPC4Q5SXM2 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
SNAPC4Q5SXM2 AL645733.1-201ENST00000402250 217 ntBASIC9.72□□□□□ -0.85
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms