RNA–Protein interactions for RNA: ENST00000370658.9

LGSN-202, Transcript of lengsin, lens protein with glutamine synthetase domain, humanhuman

TSL 1 (best) BASIC

Gene LGSN, Length 5,213 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGSN-202ENST00000370658 PELP1Q8IZL8 1130 aaKnown RBP14.09□□□□□ -0.15
LGSN-202ENST00000370658 MYT1Q01538 1121 aa14.09□□□□□ -0.15
LGSN-202ENST00000370658 NISCHQ9Y2I1 1504 aa13.75□□□□□ -0.21
LGSN-202ENST00000370658 ZEB1P37275 1124 aaPredicted RBP13.31□□□□□ -0.28
LGSN-202ENST00000370658 TTBK1Q5TCY1 1321 aaPredicted RBP13.1□□□□□ -0.31
LGSN-202ENST00000370658 CENPBP07199 599 aaPredicted RBP13.08□□□□□ -0.32
LGSN-202ENST00000370658 HRCP23327 699 aa13.08□□□□□ -0.32
LGSN-202ENST00000370658 PCGF6Q9BYE7 350 aa12.82□□□□□ -0.36
LGSN-202ENST00000370658 SUPT5HO00267 1087 aaKnown RBP12.81□□□□□ -0.36
LGSN-202ENST00000370658 CCER1Q8TC90 406 aaPredicted RBP12.71□□□□□ -0.37
LGSN-202ENST00000370658 TRIM26Q12899 539 aaPredicted RBP12.67□□□□□ -0.38
LGSN-202ENST00000370658 ERICH6Q7L0X2 663 aa12.55□□□□□ -0.4
LGSN-202ENST00000370658 CLSPNQ9HAW4 1339 aa12.47□□□□□ -0.41
LGSN-202ENST00000370658 SHROOM4Q9ULL8 1493 aa12.46□□□□□ -0.41
LGSN-202ENST00000370658 DCAF1Q9Y4B6 1507 aa12.39□□□□□ -0.43
LGSN-202ENST00000370658 DCAF8L2P0C7V8 631 aa12.33□□□□□ -0.44
LGSN-202ENST00000370658 NEFLP07196 543 aa12.32□□□□□ -0.44
LGSN-202ENST00000370658 ACIN1Q9UKV3 1341 aaKnown RBP12.31□□□□□ -0.44
LGSN-202ENST00000370658 YTHDC1Q96MU7 727 aaKnown RBP12.28□□□□□ -0.44
LGSN-202ENST00000370658 MYT1LQ9UL68 1186 aa12.27□□□□□ -0.44
LGSN-202ENST00000370658 CHIC1Q5VXU3 224 aa12.23□□□□□ -0.45
LGSN-202ENST00000370658 APLP2Q06481 763 aa12.23□□□□□ -0.45
LGSN-202ENST00000370658 PPARGC1BQ86YN6 1023 aaKnown RBP12.22□□□□□ -0.45
LGSN-202ENST00000370658 CCDC180Q9P1Z9 1646 aa12.19□□□□□ -0.46
LGSN-202ENST00000370658 DIEXFQ68CQ4 756 aaKnown RBP12.18□□□□□ -0.46
LGSN-202ENST00000370658 GTF3C3Q9Y5Q9 886 aa12.17□□□□□ -0.46
LGSN-202ENST00000370658 TRIM41Q8WV44 630 aa12.12□□□□□ -0.47
LGSN-202ENST00000370658 SCAF1Q9H7N4 1312 aaKnown RBP12.06□□□□□ -0.48
LGSN-202ENST00000370658 ZNF316A6NFI3 1004 aaPredicted RBP11.96□□□□□ -0.5
LGSN-202ENST00000370658 RTL5Q5HYW3 569 aaPredicted RBP11.95□□□□□ -0.5
LGSN-202ENST00000370658 ANP32EQ9BTT0 268 aa11.89□□□□□ -0.51
LGSN-202ENST00000370658 FAM9AQ8IZU1 332 aaPredicted RBP11.86□□□□□ -0.51
LGSN-202ENST00000370658 NEUROD1Q13562 356 aa11.82□□□□□ -0.52
LGSN-202ENST00000370658 CDK11AQ9UQ88 783 aaPredicted RBP11.82□□□□□ -0.52
LGSN-202ENST00000370658 LOC105371045A0A1W2PR82 267 aa11.8□□□□□ -0.52
LGSN-202ENST00000370658 GLIPR1L2Q4G1C9 344 aa11.79□□□□□ -0.52
LGSN-202ENST00000370658 DAXXQ9UER7 740 aaPredicted RBP11.77□□□□□ -0.53
LGSN-202ENST00000370658 EHMT2Q96KQ7 1210 aa11.73□□□□□ -0.53
LGSN-202ENST00000370658 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.73□□□□□ -0.53
LGSN-202ENST00000370658 BCL11AQ9H165 835 aa11.71□□□□□ -0.53
LGSN-202ENST00000370658 UBTFP17480 764 aaKnown RBP11.67□□□□□ -0.54
LGSN-202ENST00000370658 ZCCHC6Q5VYS8 1495 aaKnown RBP11.65□□□□□ -0.55
LGSN-202ENST00000370658 MYO15BQ96JP2 1530 aa11.62□□□□□ -0.55
LGSN-202ENST00000370658 ANP32AP39687 249 aaKnown RBP11.61□□□□□ -0.55
LGSN-202ENST00000370658 ANP32CO43423 234 aa11.57□□□□□ -0.56
LGSN-202ENST00000370658 ERICH6BQ5W0A0 696 aa11.54□□□□□ -0.56
LGSN-202ENST00000370658 FKBP8Q14318 412 aa11.46□□□□□ -0.58
LGSN-202ENST00000370658 HNRNPUL2Q1KMD3 747 aaKnown RBP11.46□□□□□ -0.58
LGSN-202ENST00000370658 BCANQ96GW7 911 aa11.43□□□□□ -0.58
LGSN-202ENST00000370658 SUPT16HQ9Y5B9 1047 aaKnown RBP11.42□□□□□ -0.58
LGSN-202ENST00000370658 EEA1Q15075 1411 aa11.41□□□□□ -0.58
LGSN-202ENST00000370658 MIER1Q8N108 512 aa11.4□□□□□ -0.59
LGSN-202ENST00000370658 ZBTB47Q9UFB7 747 aaPredicted RBP11.38□□□□□ -0.59
LGSN-202ENST00000370658 DDRGK1Q96HY6 314 aa11.37□□□□□ -0.59
LGSN-202ENST00000370658 PPM1GO15355 546 aaPredicted RBP11.34□□□□□ -0.59
LGSN-202ENST00000370658 EIF5BO60841 1220 aaKnown RBP11.31□□□□□ -0.6
LGSN-202ENST00000370658 TSHZ2Q9NRE2 1034 aa11.28□□□□□ -0.6
LGSN-202ENST00000370658 NOP58Q9Y2X3 529 aaKnown RBP11.28□□□□□ -0.6
LGSN-202ENST00000370658 CSRNP3Q8WYN3 585 aa11.26□□□□□ -0.61
LGSN-202ENST00000370658 DEKP35659 375 aaKnown RBP11.25□□□□□ -0.61
LGSN-202ENST00000370658 CCER2I3L3R5 266 aa11.25□□□□□ -0.61
LGSN-202ENST00000370658 PPP4R2Q9NY27 417 aa11.24□□□□□ -0.61
LGSN-202ENST00000370658 FANCIQ9NVI1 1328 aa11.24□□□□□ -0.61
LGSN-202ENST00000370658 RBM19Q9Y4C8 960 aaKnown RBP11.24□□□□□ -0.61
LGSN-202ENST00000370658 RB1CC1Q8TDY2 1594 aa11.23□□□□□ -0.61
LGSN-202ENST00000370658 TNIKQ9UKE5 1360 aa11.23□□□□□ -0.61
LGSN-202ENST00000370658 ANP32BQ92688 251 aaKnown RBP11.22□□□□□ -0.61
LGSN-202ENST00000370658 GOLGA3Q08378 1498 aa11.21□□□□□ -0.62
LGSN-202ENST00000370658 TIMELESSQ9UNS1 1208 aa11.2□□□□□ -0.62
LGSN-202ENST00000370658 USP35Q9P2H5 1018 aa11.18□□□□□ -0.62
LGSN-202ENST00000370658 CEP162Q5TB80 1403 aa11.17□□□□□ -0.62
LGSN-202ENST00000370658 NBR1Q14596 966 aa11.17□□□□□ -0.62
LGSN-202ENST00000370658 WRNQ14191 1432 aaPredicted RBP eCLIP11.17□□□□□ -0.62
LGSN-202ENST00000370658 NCLP19338 710 aaKnown RBP11.16□□□□□ -0.62
LGSN-202ENST00000370658 RSPH6AQ9H0K4 717 aa11.15□□□□□ -0.62
LGSN-202ENST00000370658 CCDC136Q96JN2 1154 aa11.14□□□□□ -0.63
LGSN-202ENST00000370658 HNRNPUQ00839 825 aaKnown RBP eCLIP11.13□□□□□ -0.63
LGSN-202ENST00000370658 RANGAP1P46060 587 aaPredicted RBP11.13□□□□□ -0.63
LGSN-202ENST00000370658 L1TD1Q5T7N2 865 aaKnown RBP11.12□□□□□ -0.63
LGSN-202ENST00000370658 TNNT2P45379 298 aaPredicted RBP11.12□□□□□ -0.63
LGSN-202ENST00000370658 TONSLQ96HA7 1378 aa11.12□□□□□ -0.63
LGSN-202ENST00000370658 NEFMP07197 916 aa11.12□□□□□ -0.63
LGSN-202ENST00000370658 ABCC9O60706 1549 aa11.11□□□□□ -0.63
LGSN-202ENST00000370658 UPF2Q9HAU5 1272 aaKnown RBP11.1□□□□□ -0.63
LGSN-202ENST00000370658 ITGAEP38570 1179 aa11.09□□□□□ -0.63
LGSN-202ENST00000370658 BECN1Q14457 450 aa11.09□□□□□ -0.63
LGSN-202ENST00000370658 PRKCSHP14314 528 aaPredicted RBP11.09□□□□□ -0.63
LGSN-202ENST00000370658 ATP1B4Q9UN42 357 aaPredicted RBP11.08□□□□□ -0.64
LGSN-202ENST00000370658 CEP164Q9UPV0 1460 aa11.07□□□□□ -0.64
LGSN-202ENST00000370658 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.06□□□□□ -0.64
LGSN-202ENST00000370658 TRIM44Q96DX7 344 aaPredicted RBP11.06□□□□□ -0.64
LGSN-202ENST00000370658 CLIP1P30622 1438 aa11.06□□□□□ -0.64
LGSN-202ENST00000370658 NPM2Q86SE8 214 aaKnown RBP11.05□□□□□ -0.64
LGSN-202ENST00000370658 DDX10Q13206 875 aaKnown RBP11.05□□□□□ -0.64
LGSN-202ENST00000370658 RSF1Q96T23 1441 aaPredicted RBP11.04□□□□□ -0.64
LGSN-202ENST00000370658 FAM50AQ14320 339 aaKnown RBP11.04□□□□□ -0.64
LGSN-202ENST00000370658 ARID4BQ4LE39 1312 aaPredicted RBP11.02□□□□□ -0.65
LGSN-202ENST00000370658 PTMSP20962 102 aa11.01□□□□□ -0.65
LGSN-202ENST00000370658 IPO9Q96P70 1041 aaKnown RBP11.01□□□□□ -0.65
LGSN-202ENST00000370658 HSP90AA1P07900 732 aaKnown RBP11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 328.8 ms