RNA–Protein interactions for RNA: ENST00000414600.1

SOX9-AS1-202, SOX9 antisense RNA 1, humanhuman

TSL 3 BASIC

Gene SOX9-AS1, Length 742 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-AS1-202ENST00000414600 AEBP2Q6ZN18 517 aaPredicted RBP27.11■■□□□ 1.93
SOX9-AS1-202ENST00000414600 CHIC1Q5VXU3 224 aa25.34■■□□□ 1.65
SOX9-AS1-202ENST00000414600 SENP3Q9H4L4 574 aaPredicted RBP23.27■■□□□ 1.32
SOX9-AS1-202ENST00000414600 PHF23Q9BUL5 403 aaPredicted RBP22.86■■□□□ 1.25
SOX9-AS1-202ENST00000414600 FOXD1Q16676 465 aa21.79■■□□□ 1.08
SOX9-AS1-202ENST00000414600 POTEDQ86YR6 584 aa21.63■■□□□ 1.05
SOX9-AS1-202ENST00000414600 MSH5O43196 834 aa20.71■□□□□ 0.91
SOX9-AS1-202ENST00000414600 PIAS4Q8N2W9 510 aaPredicted RBP20.17■□□□□ 0.82
SOX9-AS1-202ENST00000414600 PPP6R1Q9UPN7 881 aa19.74■□□□□ 0.75
SOX9-AS1-202ENST00000414600 ADRA2BP18089 450 aa19.64■□□□□ 0.73
SOX9-AS1-202ENST00000414600 PLPPR3Q6T4P5 718 aa19.56■□□□□ 0.72
SOX9-AS1-202ENST00000414600 DMRT2Q9Y5R5 561 aa18.32■□□□□ 0.52
SOX9-AS1-202ENST00000414600 CACNB1Q02641 598 aaPredicted RBP18.31■□□□□ 0.52
SOX9-AS1-202ENST00000414600 MAPK8IP2Q13387 824 aaPredicted RBP18.29■□□□□ 0.52
SOX9-AS1-202ENST00000414600 SCAF1Q9H7N4 1312 aaKnown RBP17.98■□□□□ 0.47
SOX9-AS1-202ENST00000414600 DCAF8L1A6NGE4 600 aa17.66■□□□□ 0.42
SOX9-AS1-202ENST00000414600 RNF39Q9H2S5 420 aa17.59■□□□□ 0.41
SOX9-AS1-202ENST00000414600 HOXD11P31277 338 aaPredicted RBP17.3■□□□□ 0.36
SOX9-AS1-202ENST00000414600 C1QBPQ07021 282 aaKnown RBP17.29■□□□□ 0.36
SOX9-AS1-202ENST00000414600 PPP4R3CPQ6ZMV5 832 aa17.04■□□□□ 0.32
SOX9-AS1-202ENST00000414600 RNF216Q9NWF9 866 aaPredicted RBP16.96■□□□□ 0.31
SOX9-AS1-202ENST00000414600 CNKSR2Q8WXI2 1034 aa16.91■□□□□ 0.3
SOX9-AS1-202ENST00000414600 DNAJC5BQ9UF47 199 aa16.86■□□□□ 0.29
SOX9-AS1-202ENST00000414600 POTEHQ6S545 545 aa16.8■□□□□ 0.28
SOX9-AS1-202ENST00000414600 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.53■□□□□ 0.24
SOX9-AS1-202ENST00000414600 DSG3P32926 999 aa16.2■□□□□ 0.18
SOX9-AS1-202ENST00000414600 NCBP3Q53F19 620 aaKnown RBP16.14■□□□□ 0.17
SOX9-AS1-202ENST00000414600 CAPN15O75808 1086 aa16.12■□□□□ 0.17
SOX9-AS1-202ENST00000414600 SPINK5Q9NQ38 1064 aaPredicted RBP16.09■□□□□ 0.17
SOX9-AS1-202ENST00000414600 U3KPZ7 1027 aaPredicted RBP16.06■□□□□ 0.16
SOX9-AS1-202ENST00000414600 SLC24A1O60721 1099 aa15.92■□□□□ 0.14
SOX9-AS1-202ENST00000414600 NPM3O75607 178 aaKnown RBP15.89■□□□□ 0.13
SOX9-AS1-202ENST00000414600 ABCB7O75027 752 aa15.67■□□□□ 0.1
SOX9-AS1-202ENST00000414600 TRHP20396 242 aaPredicted RBP15.67■□□□□ 0.1
SOX9-AS1-202ENST00000414600 ZNF219Q9P2Y4 722 aaPredicted RBP15.57■□□□□ 0.08
SOX9-AS1-202ENST00000414600 APLP2Q06481 763 aa15.53■□□□□ 0.08
SOX9-AS1-202ENST00000414600 RBM42Q9BTD8 480 aaKnown RBP15.49■□□□□ 0.07
SOX9-AS1-202ENST00000414600 CHRDL2Q6WN34 429 aa15.48■□□□□ 0.07
SOX9-AS1-202ENST00000414600 SLC4A2P04920 1241 aa15.39■□□□□ 0.05
SOX9-AS1-202ENST00000414600 SP7Q8TDD2 431 aaPredicted RBP15.35■□□□□ 0.05
SOX9-AS1-202ENST00000414600 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.32■□□□□ 0.04
SOX9-AS1-202ENST00000414600 HNRNPUL2Q1KMD3 747 aaKnown RBP15.32■□□□□ 0.04
SOX9-AS1-202ENST00000414600 SAMD1Q6SPF0 538 aaPredicted RBP15.2■□□□□ 0.02
SOX9-AS1-202ENST00000414600 POLA2Q14181 598 aa15.05■□□□□ -0
SOX9-AS1-202ENST00000414600 AKT1S1Q96B36 256 aa14.94□□□□□ -0.02
SOX9-AS1-202ENST00000414600 EHMT2Q96KQ7 1210 aa14.94□□□□□ -0.02
SOX9-AS1-202ENST00000414600 PIP4P2Q8N4L2 257 aa14.93□□□□□ -0.02
SOX9-AS1-202ENST00000414600 HAX1O00165 279 aa14.92□□□□□ -0.02
SOX9-AS1-202ENST00000414600 KCNA4P22459 653 aa14.87□□□□□ -0.03
SOX9-AS1-202ENST00000414600 REM2Q8IYK8 340 aaPredicted RBP14.82□□□□□ -0.04
SOX9-AS1-202ENST00000414600 MYCNP04198 464 aaPredicted RBP14.72□□□□□ -0.05
SOX9-AS1-202ENST00000414600 FXR2P51116 673 aaKnown RBP eCLIP14.69□□□□□ -0.06
SOX9-AS1-202ENST00000414600 PITPNM1O00562 1244 aa14.66□□□□□ -0.06
SOX9-AS1-202ENST00000414600 ZBTB12Q9Y330 459 aaPredicted RBP14.66□□□□□ -0.06
SOX9-AS1-202ENST00000414600 EVX2Q03828 476 aa14.64□□□□□ -0.07
SOX9-AS1-202ENST00000414600 OSCARQ8IYS5 282 aa14.59□□□□□ -0.07
SOX9-AS1-202ENST00000414600 ATF5Q9Y2D1 282 aaPredicted RBP14.45□□□□□ -0.1
SOX9-AS1-202ENST00000414600 LHX8Q68G74 356 aa14.39□□□□□ -0.11
SOX9-AS1-202ENST00000414600 RTN4Q9NQC3 1192 aaKnown RBP14.38□□□□□ -0.11
SOX9-AS1-202ENST00000414600 DAXXQ9UER7 740 aaPredicted RBP14.35□□□□□ -0.11
SOX9-AS1-202ENST00000414600 AMER1Q5JTC6 1135 aaPredicted RBP14.32□□□□□ -0.12
SOX9-AS1-202ENST00000414600 PRKAR2AP13861 404 aaKnown RBP14.29□□□□□ -0.12
SOX9-AS1-202ENST00000414600 GABBR2O75899 941 aa14.27□□□□□ -0.13
SOX9-AS1-202ENST00000414600 C19orf67A6NJJ6 358 aa14.25□□□□□ -0.13
SOX9-AS1-202ENST00000414600 PLSCR2Q9NRY7 297 aa14.21□□□□□ -0.13
SOX9-AS1-202ENST00000414600 CLEC11AQ9Y240 323 aa14.15□□□□□ -0.14
SOX9-AS1-202ENST00000414600 SPDYE2BA6NHP3 402 aa14.14□□□□□ -0.15
SOX9-AS1-202ENST00000414600 SPDYE6P0CI01 402 aa14.14□□□□□ -0.15
SOX9-AS1-202ENST00000414600 SPDYE2Q495Y8 402 aa14.14□□□□□ -0.15
SOX9-AS1-202ENST00000414600 FOXD4L1Q9NU39 408 aa14.12□□□□□ -0.15
SOX9-AS1-202ENST00000414600 SPDYE1Q8NFV5 336 aaPredicted RBP14.11□□□□□ -0.15
SOX9-AS1-202ENST00000414600 CSRNP3Q8WYN3 585 aa14.07□□□□□ -0.16
SOX9-AS1-202ENST00000414600 FBLN2P98095 1184 aa13.96□□□□□ -0.17
SOX9-AS1-202ENST00000414600 POTEIP0CG38 1075 aa13.95□□□□□ -0.18
SOX9-AS1-202ENST00000414600 CHADLQ6NUI6 762 aa13.95□□□□□ -0.18
SOX9-AS1-202ENST00000414600 SLC4A1APQ9BWU0 796 aaKnown RBP13.87□□□□□ -0.19
SOX9-AS1-202ENST00000414600 ZNF692Q9BU19 519 aaPredicted RBP13.85□□□□□ -0.19
SOX9-AS1-202ENST00000414600 SSUH2Q9Y2M2 353 aa13.84□□□□□ -0.19
SOX9-AS1-202ENST00000414600 PRR29P0C7W0 189 aa13.79□□□□□ -0.2
SOX9-AS1-202ENST00000414600 CD44P16070 742 aaKnown RBP13.78□□□□□ -0.2
SOX9-AS1-202ENST00000414600 ATXN8OSP0DMR3 200 aa13.75□□□□□ -0.21
SOX9-AS1-202ENST00000414600 CLCN6P51797 869 aa13.74□□□□□ -0.21
SOX9-AS1-202ENST00000414600 MKRN4PQ13434 485 aaPredicted RBP13.74□□□□□ -0.21
SOX9-AS1-202ENST00000414600 DCBLD2Q96PD2 775 aa13.73□□□□□ -0.21
SOX9-AS1-202ENST00000414600 ARXQ96QS3 562 aa13.71□□□□□ -0.21
SOX9-AS1-202ENST00000414600 FARP1Q9Y4F1 1045 aaPredicted RBP13.66□□□□□ -0.22
SOX9-AS1-202ENST00000414600 ZBTB22O15209 634 aa13.63□□□□□ -0.23
SOX9-AS1-202ENST00000414600 PABPN1Q86U42 306 aaKnown RBP eCLIP13.62□□□□□ -0.23
SOX9-AS1-202ENST00000414600 POTEMA6NI47 508 aa13.61□□□□□ -0.23
SOX9-AS1-202ENST00000414600 OTUD5Q96G74 571 aa13.6□□□□□ -0.23
SOX9-AS1-202ENST00000414600 PRKCSHP14314 528 aaPredicted RBP13.59□□□□□ -0.23
SOX9-AS1-202ENST00000414600 NISCHQ9Y2I1 1504 aa13.55□□□□□ -0.24
SOX9-AS1-202ENST00000414600 POTEGQ6S5H5 508 aa13.53□□□□□ -0.24
SOX9-AS1-202ENST00000414600 TTBK1Q5TCY1 1321 aaPredicted RBP13.53□□□□□ -0.24
SOX9-AS1-202ENST00000414600 ZNF579Q8NAF0 562 aaKnown RBP13.51□□□□□ -0.25
SOX9-AS1-202ENST00000414600 POTEB2H3BUK9 544 aa13.48□□□□□ -0.25
SOX9-AS1-202ENST00000414600 ZRANB1Q9UGI0 708 aa13.47□□□□□ -0.25
SOX9-AS1-202ENST00000414600 GALR2O43603 387 aaPredicted RBP13.43□□□□□ -0.26
SOX9-AS1-202ENST00000414600 PCDH10Q9P2E7 1040 aa13.41□□□□□ -0.26
SOX9-AS1-202ENST00000414600 TAOK2Q9UL54 1235 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 127.1 ms