Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 AC091953.3-201ENST00000623220 236 ntBASIC3.69□□□□□ -1.82
APOBP04114 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
APOBP04114 LINC01226-208ENST00000640623 5019 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
APOBP04114 AC001226.2-204ENST00000638101 2645 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
APOBP04114 AC087516.1-201ENST00000561236 2428 ntBASIC3.69□□□□□ -1.82
APOBP04114 ZNF23-204ENST00000428724 1932 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
APOBP04114 ZNF888-202ENST00000638862 4195 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
APOBP04114 ALB-209ENST00000503124 1741 ntTSL 5 BASIC3.69□□□□□ -1.82
APOBP04114 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
APOBP04114 OR4K12P-201ENST00000406538 961 ntBASIC3.69□□□□□ -1.82
APOBP04114 AC016397.1-201ENST00000412463 242 ntBASIC3.69□□□□□ -1.82
APOBP04114 RPS7P8-201ENST00000418311 581 ntBASIC3.69□□□□□ -1.82
APOBP04114 AC091390.2-201ENST00000432573 374 ntBASIC3.69□□□□□ -1.82
APOBP04114 AL161722.1-201ENST00000446972 1032 ntBASIC3.69□□□□□ -1.82
APOBP04114 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
APOBP04114 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
APOBP04114 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC3.69□□□□□ -1.82
APOBP04114 OR4A42P-201ENST00000531397 938 ntBASIC3.69□□□□□ -1.82
APOBP04114 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC3.69□□□□□ -1.82
APOBP04114 AC087783.2-201ENST00000605070 562 ntBASIC3.69□□□□□ -1.82
APOBP04114 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC3.69□□□□□ -1.82
APOBP04114 MYH11-203ENST00000452625 6886 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
APOBP04114 NTRK3-212ENST00000558676 4670 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
APOBP04114 NHSL2-207ENST00000633930 13660 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
APOBP04114 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC3.69□□□□□ -1.82
APOBP04114 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
APOBP04114 RASGRP3-202ENST00000403687 4807 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
APOBP04114 VCL-201ENST00000211998 5490 ntAPPRIS P4 TSL 1 (best) BASIC3.69□□□□□ -1.82
APOBP04114 ZNF438-208ENST00000538351 3284 ntAPPRIS ALT2 TSL 2 BASIC3.69□□□□□ -1.82
APOBP04114 CHST6-201ENST00000332272 7957 ntAPPRIS P1 TSL 3 BASIC3.69□□□□□ -1.82
APOBP04114 NCKAP5-203ENST00000405974 3636 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
APOBP04114 FO082842.1-201ENST00000423552 1370 ntBASIC3.69□□□□□ -1.82
APOBP04114 CTAGE11P-201ENST00000451540 2353 ntBASIC3.68□□□□□ -1.82
APOBP04114 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
APOBP04114 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC3.68□□□□□ -1.82
APOBP04114 COL4A6-210ENST00000621266 6627 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
APOBP04114 AFP-201ENST00000226359 1914 ntTSL 5 BASIC3.68□□□□□ -1.82
APOBP04114 CELF1-204ENST00000395290 7666 ntAPPRIS ALT1 TSL 2 BASIC3.68□□□□□ -1.82
APOBP04114 AL589647.1-201ENST00000402485 466 ntBASIC3.68□□□□□ -1.82
APOBP04114 OR6E1P-201ENST00000414424 923 ntBASIC3.68□□□□□ -1.82
APOBP04114 PTCD2P2-201ENST00000415579 1095 ntBASIC3.68□□□□□ -1.82
APOBP04114 CYP4F32P-201ENST00000426492 504 ntBASIC3.68□□□□□ -1.82
APOBP04114 RPL7L1P9-201ENST00000431298 745 ntBASIC3.68□□□□□ -1.82
APOBP04114 CEACAMP9-201ENST00000442990 513 ntBASIC3.68□□□□□ -1.82
APOBP04114 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
APOBP04114 AC083795.1-201ENST00000491760 320 ntBASIC3.68□□□□□ -1.82
APOBP04114 AC008897.1-201ENST00000494006 347 ntBASIC3.68□□□□□ -1.82
APOBP04114 RPL37AP8-201ENST00000494116 276 ntBASIC3.68□□□□□ -1.82
APOBP04114 AC095057.1-201ENST00000507583 168 ntBASIC3.68□□□□□ -1.82
APOBP04114 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC3.68□□□□□ -1.82
APOBP04114 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC3.68□□□□□ -1.82
APOBP04114 OR6M2P-201ENST00000529831 871 ntBASIC3.68□□□□□ -1.82
APOBP04114 HMGB1P42-201ENST00000532126 553 ntBASIC3.68□□□□□ -1.82
APOBP04114 DCN-209ENST00000546745 1026 ntTSL 3 BASIC3.68□□□□□ -1.82
APOBP04114 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC3.68□□□□□ -1.82
APOBP04114 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC3.68□□□□□ -1.82
APOBP04114 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC3.68□□□□□ -1.82
APOBP04114 ARFGAP2-230ENST00000629231 213 ntTSL 5 BASIC3.68□□□□□ -1.82
APOBP04114 TTLL4-201ENST00000258398 4730 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
APOBP04114 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC3.68□□□□□ -1.82
APOBP04114 ARHGAP21-201ENST00000320481 4343 ntTSL 5 BASIC3.68□□□□□ -1.82
APOBP04114 CTC1-201ENST00000315684 7021 ntAPPRIS P2 TSL 1 (best) BASIC3.68□□□□□ -1.82
APOBP04114 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
APOBP04114 GREB1L-201ENST00000269218 5600 ntTSL 5 BASIC3.68□□□□□ -1.82
APOBP04114 LINC01630-208ENST00000635680 4363 ntTSL 5 BASIC3.68□□□□□ -1.82
APOBP04114 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
APOBP04114 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
APOBP04114 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
APOBP04114 NCAM1-222ENST00000615285 6045 ntTSL 5 BASIC3.68□□□□□ -1.82
APOBP04114 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
APOBP04114 AC245047.1-201ENST00000433276 873 ntBASIC3.68□□□□□ -1.82
APOBP04114 LAMTOR5-AS1-201ENST00000444238 881 ntTSL 5 BASIC3.68□□□□□ -1.82
APOBP04114 AP000676.2-201ENST00000529711 301 ntBASIC3.68□□□□□ -1.82
APOBP04114 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC3.68□□□□□ -1.82
APOBP04114 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC3.68□□□□□ -1.82
APOBP04114 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC3.68□□□□□ -1.82
APOBP04114 AC114786.1-201ENST00000512892 1415 ntBASIC3.68□□□□□ -1.82
APOBP04114 EPB41-204ENST00000356093 5857 ntTSL 5 BASIC3.68□□□□□ -1.82
APOBP04114 AC022905.1-201ENST00000503430 3048 ntBASIC3.68□□□□□ -1.82
APOBP04114 AC011379.1-201ENST00000508713 3025 ntBASIC3.68□□□□□ -1.82
APOBP04114 CDK5RAP2-203ENST00000360822 5551 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
APOBP04114 AC025809.2-201ENST00000625085 1802 ntBASIC3.68□□□□□ -1.82
APOBP04114 HERC3-202ENST00000402738 4974 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
APOBP04114 AL138756.1-201ENST00000563434 4488 ntTSL 2 BASIC3.68□□□□□ -1.82
APOBP04114 SOX6-208ENST00000527619 2699 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
APOBP04114 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
APOBP04114 RPS15AP30-201ENST00000420976 390 ntBASIC3.68□□□□□ -1.82
APOBP04114 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC3.68□□□□□ -1.82
APOBP04114 RN7SL459P-201ENST00000481078 302 ntBASIC3.68□□□□□ -1.82
APOBP04114 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC3.68□□□□□ -1.82
APOBP04114 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC3.68□□□□□ -1.82
APOBP04114 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC3.68□□□□□ -1.82
APOBP04114 AC008938.1-201ENST00000566929 6510 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
APOBP04114 SYNPO2-203ENST00000434046 3588 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
APOBP04114 SERPINA10-201ENST00000261994 4978 ntAPPRIS P2 TSL 1 (best) BASIC3.68□□□□□ -1.82
APOBP04114 AL662795.2-201ENST00000624252 3706 ntBASIC3.68□□□□□ -1.82
APOBP04114 XIST-206ENST00000434839 2865 ntTSL 5 BASIC3.68□□□□□ -1.82
APOBP04114 EPHA5-201ENST00000273854 8266 ntAPPRIS P4 TSL 1 (best) BASIC3.68□□□□□ -1.82
APOBP04114 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
APOBP04114 MFSD8-219ENST00000641228 2559 ntBASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 68.6 ms