RNA–Protein interactions for RNA: ENST00000640623.1

LINC01226-208, Transcript of long intergenic non-protein coding RNA 1226, humanhuman

TSL 1 (best) BASIC

Gene LINC01226, Length 5,019 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01226-208ENST00000640623 DCAF8L2P0C7V8 631 aa16.7■□□□□ 0.26
LINC01226-208ENST00000640623 PELP1Q8IZL8 1130 aaKnown RBP16.29■□□□□ 0.2
LINC01226-208ENST00000640623 SUPT5HO00267 1087 aaKnown RBP15.97■□□□□ 0.15
LINC01226-208ENST00000640623 APLP2Q06481 763 aa15.68■□□□□ 0.1
LINC01226-208ENST00000640623 CCER1Q8TC90 406 aaPredicted RBP15.53■□□□□ 0.08
LINC01226-208ENST00000640623 FAM9AQ8IZU1 332 aaPredicted RBP15.5■□□□□ 0.07
LINC01226-208ENST00000640623 CENPBP07199 599 aaPredicted RBP15.44■□□□□ 0.06
LINC01226-208ENST00000640623 ERICH6Q7L0X2 663 aa15.43■□□□□ 0.06
LINC01226-208ENST00000640623 NISCHQ9Y2I1 1504 aa15.39■□□□□ 0.05
LINC01226-208ENST00000640623 MYT1Q01538 1121 aa15.39■□□□□ 0.05
LINC01226-208ENST00000640623 SHROOM4Q9ULL8 1493 aa15.38■□□□□ 0.05
LINC01226-208ENST00000640623 ZEB1P37275 1124 aaPredicted RBP15.36■□□□□ 0.05
LINC01226-208ENST00000640623 EHMT2Q96KQ7 1210 aa15.36■□□□□ 0.05
LINC01226-208ENST00000640623 PCGF6Q9BYE7 350 aa15.15■□□□□ 0.02
LINC01226-208ENST00000640623 NEFLP07196 543 aa15.12■□□□□ 0.01
LINC01226-208ENST00000640623 TTBK1Q5TCY1 1321 aaPredicted RBP14.93□□□□□ -0.02
LINC01226-208ENST00000640623 TRIM41Q8WV44 630 aa14.9□□□□□ -0.02
LINC01226-208ENST00000640623 ATP1B4Q9UN42 357 aaPredicted RBP14.78□□□□□ -0.04
LINC01226-208ENST00000640623 UBTFP17480 764 aaKnown RBP14.78□□□□□ -0.04
LINC01226-208ENST00000640623 DAXXQ9UER7 740 aaPredicted RBP14.76□□□□□ -0.05
LINC01226-208ENST00000640623 YTHDC1Q96MU7 727 aaKnown RBP14.75□□□□□ -0.05
LINC01226-208ENST00000640623 RANGAP1P46060 587 aaPredicted RBP14.73□□□□□ -0.05
LINC01226-208ENST00000640623 TRIM26Q12899 539 aaPredicted RBP14.6□□□□□ -0.07
LINC01226-208ENST00000640623 HRCP23327 699 aa14.46□□□□□ -0.09
LINC01226-208ENST00000640623 RTL5Q5HYW3 569 aaPredicted RBP14.44□□□□□ -0.1
LINC01226-208ENST00000640623 ZNF316A6NFI3 1004 aaPredicted RBP14.34□□□□□ -0.11
LINC01226-208ENST00000640623 POLR3GLQ9BT43 218 aa14.34□□□□□ -0.11
LINC01226-208ENST00000640623 MYT1LQ9UL68 1186 aa14.3□□□□□ -0.12
LINC01226-208ENST00000640623 CLSPNQ9HAW4 1339 aa14.28□□□□□ -0.12
LINC01226-208ENST00000640623 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.27□□□□□ -0.13
LINC01226-208ENST00000640623 HNRNPUL2Q1KMD3 747 aaKnown RBP14.27□□□□□ -0.13
LINC01226-208ENST00000640623 PPARGC1BQ86YN6 1023 aaKnown RBP14.26□□□□□ -0.13
LINC01226-208ENST00000640623 ITGAEP38570 1179 aa14.25□□□□□ -0.13
LINC01226-208ENST00000640623 DIEXFQ68CQ4 756 aaKnown RBP14.16□□□□□ -0.14
LINC01226-208ENST00000640623 SLC4A1APQ9BWU0 796 aaKnown RBP14.09□□□□□ -0.15
LINC01226-208ENST00000640623 CHIC1Q5VXU3 224 aa14.08□□□□□ -0.16
LINC01226-208ENST00000640623 ZBTB47Q9UFB7 747 aaPredicted RBP14.08□□□□□ -0.16
LINC01226-208ENST00000640623 CNGB1Q14028 1251 aaPredicted RBP14.05□□□□□ -0.16
LINC01226-208ENST00000640623 CDK11AQ9UQ88 783 aaPredicted RBP14.05□□□□□ -0.16
LINC01226-208ENST00000640623 LOC105371045A0A1W2PR82 267 aa14□□□□□ -0.17
LINC01226-208ENST00000640623 ANP32CO43423 234 aa13.99□□□□□ -0.17
LINC01226-208ENST00000640623 TRIM52Q96A61 297 aa13.93□□□□□ -0.18
LINC01226-208ENST00000640623 FAM50AQ14320 339 aaKnown RBP13.92□□□□□ -0.18
LINC01226-208ENST00000640623 GTF3C3Q9Y5Q9 886 aa13.88□□□□□ -0.19
LINC01226-208ENST00000640623 NEFMP07197 916 aa13.88□□□□□ -0.19
LINC01226-208ENST00000640623 ANP32AP39687 249 aaKnown RBP13.87□□□□□ -0.19
LINC01226-208ENST00000640623 CANXP27824 592 aaKnown RBP13.84□□□□□ -0.19
LINC01226-208ENST00000640623 NEUROD1Q13562 356 aa13.82□□□□□ -0.2
LINC01226-208ENST00000640623 BCANQ96GW7 911 aa13.82□□□□□ -0.2
LINC01226-208ENST00000640623 ANP32BQ92688 251 aaKnown RBP13.81□□□□□ -0.2
LINC01226-208ENST00000640623 GLIPR1L2Q4G1C9 344 aa13.73□□□□□ -0.21
LINC01226-208ENST00000640623 ZNF326Q5BKZ1 582 aaKnown RBP13.73□□□□□ -0.21
LINC01226-208ENST00000640623 ACIN1Q9UKV3 1341 aaKnown RBP13.71□□□□□ -0.21
LINC01226-208ENST00000640623 UPF2Q9HAU5 1272 aaKnown RBP13.68□□□□□ -0.22
LINC01226-208ENST00000640623 HSP90AA1P07900 732 aaKnown RBP13.63□□□□□ -0.23
LINC01226-208ENST00000640623 SLC24A1O60721 1099 aa13.63□□□□□ -0.23
LINC01226-208ENST00000640623 EIF5BO60841 1220 aaKnown RBP13.61□□□□□ -0.23
LINC01226-208ENST00000640623 NPM2Q86SE8 214 aaKnown RBP13.56□□□□□ -0.24
LINC01226-208ENST00000640623 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.54□□□□□ -0.24
LINC01226-208ENST00000640623 BCL11AQ9H165 835 aa13.54□□□□□ -0.24
LINC01226-208ENST00000640623 FKBP8Q14318 412 aa13.5□□□□□ -0.25
LINC01226-208ENST00000640623 CSRNP3Q8WYN3 585 aa13.5□□□□□ -0.25
LINC01226-208ENST00000640623 TONSLQ96HA7 1378 aa13.49□□□□□ -0.25
LINC01226-208ENST00000640623 HNRNPUQ00839 825 aaKnown RBP eCLIP13.46□□□□□ -0.25
LINC01226-208ENST00000640623 ANP32EQ9BTT0 268 aa13.46□□□□□ -0.26
LINC01226-208ENST00000640623 CCDC136Q96JN2 1154 aa13.44□□□□□ -0.26
LINC01226-208ENST00000640623 FBLN2P98095 1184 aa13.43□□□□□ -0.26
LINC01226-208ENST00000640623 ESF1Q9H501 851 aaKnown RBP13.42□□□□□ -0.26
LINC01226-208ENST00000640623 TMC1Q8TDI8 760 aa13.39□□□□□ -0.27
LINC01226-208ENST00000640623 ZNF777Q9ULD5 760 aaPredicted RBP13.37□□□□□ -0.27
LINC01226-208ENST00000640623 CDK11BP21127 795 aaKnown RBP13.36□□□□□ -0.27
LINC01226-208ENST00000640623 FAM9BQ8IZU0 186 aa13.35□□□□□ -0.27
LINC01226-208ENST00000640623 WDR43Q15061 677 aaKnown RBP eCLIP13.34□□□□□ -0.27
LINC01226-208ENST00000640623 DDRGK1Q96HY6 314 aa13.34□□□□□ -0.27
LINC01226-208ENST00000640623 STAG3Q9UJ98 1225 aa13.34□□□□□ -0.27
LINC01226-208ENST00000640623 DDX10Q13206 875 aaKnown RBP13.33□□□□□ -0.28
LINC01226-208ENST00000640623 BECN1Q14457 450 aa13.33□□□□□ -0.28
LINC01226-208ENST00000640623 MYH16Q9H6N6 1097 aa13.33□□□□□ -0.28
LINC01226-208ENST00000640623 P3H3Q8IVL6 736 aa13.32□□□□□ -0.28
LINC01226-208ENST00000640623 PABPN1Q86U42 306 aaKnown RBP eCLIP13.31□□□□□ -0.28
LINC01226-208ENST00000640623 GOLGA6L22H0YM25 854 aa13.31□□□□□ -0.28
LINC01226-208ENST00000640623 NCLP19338 710 aaKnown RBP13.3□□□□□ -0.28
LINC01226-208ENST00000640623 TNNT2P45379 298 aaPredicted RBP13.29□□□□□ -0.28
LINC01226-208ENST00000640623 TRIM44Q96DX7 344 aaPredicted RBP13.29□□□□□ -0.28
LINC01226-208ENST00000640623 CHGAP10645 457 aaKnown RBP13.28□□□□□ -0.28
LINC01226-208ENST00000640623 MRS2Q9HD23 443 aa13.28□□□□□ -0.28
LINC01226-208ENST00000640623 NBR1Q14596 966 aa13.27□□□□□ -0.29
LINC01226-208ENST00000640623 DCAF1Q9Y4B6 1507 aa13.25□□□□□ -0.29
LINC01226-208ENST00000640623 NPM1P06748 294 aaKnown RBP eCLIP13.24□□□□□ -0.29
LINC01226-208ENST00000640623 ARID3CA6NKF2 412 aa13.22□□□□□ -0.29
LINC01226-208ENST00000640623 TSPY4P0CV99 314 aa13.22□□□□□ -0.29
LINC01226-208ENST00000640623 TSPY10P0CW01 314 aa13.22□□□□□ -0.29
LINC01226-208ENST00000640623 ERICH6BQ5W0A0 696 aa13.22□□□□□ -0.29
LINC01226-208ENST00000640623 SALL2Q9Y467 1007 aaPredicted RBP13.21□□□□□ -0.29
LINC01226-208ENST00000640623 PPM1GO15355 546 aaPredicted RBP13.2□□□□□ -0.3
LINC01226-208ENST00000640623 ABCC9O60706 1549 aa13.19□□□□□ -0.3
LINC01226-208ENST00000640623 EIF4G2P78344 907 aaKnown RBP eCLIP13.18□□□□□ -0.3
LINC01226-208ENST00000640623 ZRSR1Q15695 479 aaKnown RBP13.17□□□□□ -0.3
LINC01226-208ENST00000640623 ARXQ96QS3 562 aa13.16□□□□□ -0.3
LINC01226-208ENST00000640623 CDCA8Q53HL2 280 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms