Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 AL353743.3-201ENST00000442109 1468 ntBASIC5□□□□□ -1.61
CD28P10747 GKN2-202ENST00000481498 1498 ntTSL 2 BASIC5□□□□□ -1.61
CD28P10747 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC5□□□□□ -1.61
CD28P10747 MROH3P-201ENST00000435735 2676 ntBASIC5□□□□□ -1.61
CD28P10747 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
CD28P10747 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC5□□□□□ -1.61
CD28P10747 NEK2P4-201ENST00000425793 1329 ntBASIC5□□□□□ -1.61
CD28P10747 AL512310.3-201ENST00000547023 1335 ntBASIC5□□□□□ -1.61
CD28P10747 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC5□□□□□ -1.61
CD28P10747 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
CD28P10747 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CD28P10747 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC5□□□□□ -1.61
CD28P10747 AC007485.2-201ENST00000623493 1667 ntBASIC5□□□□□ -1.61
CD28P10747 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
CD28P10747 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC5□□□□□ -1.61
CD28P10747 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC5□□□□□ -1.61
CD28P10747 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CD28P10747 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC5□□□□□ -1.61
CD28P10747 PCYT1B-201ENST00000356768 1289 ntTSL 1 (best) BASIC5□□□□□ -1.61
CD28P10747 FIG4-202ENST00000368941 791 ntTSL 3 BASIC5□□□□□ -1.61
CD28P10747 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC5□□□□□ -1.61
CD28P10747 MIR541-201ENST00000401360 84 ntBASIC5□□□□□ -1.61
CD28P10747 RPA3-204ENST00000406109 434 ntTSL 3 BASIC5□□□□□ -1.61
CD28P10747 AL139805.1-201ENST00000407837 289 ntBASIC5□□□□□ -1.61
CD28P10747 HSD17B7P1-201ENST00000412419 1017 ntBASIC5□□□□□ -1.61
CD28P10747 AC096537.2-201ENST00000413707 714 ntBASIC5□□□□□ -1.61
CD28P10747 LINC01291-202ENST00000418204 441 ntTSL 5 BASIC5□□□□□ -1.61
CD28P10747 RPL23AP85-201ENST00000421838 433 ntBASIC5□□□□□ -1.61
CD28P10747 AL157884.1-201ENST00000424561 454 ntBASIC5□□□□□ -1.61
CD28P10747 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC5□□□□□ -1.61
CD28P10747 AC003989.1-201ENST00000434569 565 ntBASIC5□□□□□ -1.61
CD28P10747 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC5□□□□□ -1.61
CD28P10747 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC5□□□□□ -1.61
CD28P10747 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC5□□□□□ -1.61
CD28P10747 RPL23AP64-201ENST00000469465 435 ntBASIC5□□□□□ -1.61
CD28P10747 PFN2-209ENST00000481275 560 ntTSL 4 BASIC5□□□□□ -1.61
CD28P10747 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC5□□□□□ -1.61
CD28P10747 CREM-242ENST00000490511 469 ntTSL 2 BASIC5□□□□□ -1.61
CD28P10747 AC090568.1-201ENST00000509499 856 ntBASIC5□□□□□ -1.61
CD28P10747 AC009879.1-201ENST00000520029 839 ntBASIC5□□□□□ -1.61
CD28P10747 INTS9-AS1-201ENST00000520055 548 ntTSL 5 BASIC5□□□□□ -1.61
CD28P10747 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC5□□□□□ -1.61
CD28P10747 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC5□□□□□ -1.61
CD28P10747 AC027667.1-201ENST00000545814 304 ntBASIC5□□□□□ -1.61
CD28P10747 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC5□□□□□ -1.61
CD28P10747 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC5□□□□□ -1.61
CD28P10747 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC5□□□□□ -1.61
CD28P10747 AL078623.1-201ENST00000602702 907 ntBASIC5□□□□□ -1.61
CD28P10747 AL138895.2-201ENST00000603019 178 ntBASIC5□□□□□ -1.61
CD28P10747 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC5□□□□□ -1.61
CD28P10747 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC5□□□□□ -1.61
CD28P10747 AL136097.3-201ENST00000611097 505 ntBASIC5□□□□□ -1.61
CD28P10747 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC5□□□□□ -1.61
CD28P10747 IAPP-205ENST00000542023 2015 ntTSL 2 BASIC5□□□□□ -1.61
CD28P10747 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC5□□□□□ -1.61
CD28P10747 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CD28P10747 AC001226.2-204ENST00000638101 2645 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
CD28P10747 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CD28P10747 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CD28P10747 IRF6-201ENST00000367021 4306 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CD28P10747 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CD28P10747 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC5□□□□□ -1.61
CD28P10747 REG1CP-201ENST00000377435 1705 ntTSL 1 (best) BASIC5□□□□□ -1.61
CD28P10747 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CD28P10747 VTCN1-202ENST00000359008 2581 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
CD28P10747 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC5□□□□□ -1.61
CD28P10747 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC5□□□□□ -1.61
CD28P10747 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC4.99□□□□□ -1.61
CD28P10747 MRPS27-201ENST00000261413 2785 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CD28P10747 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CD28P10747 SELE-203ENST00000367775 3389 ntTSL 5 BASIC4.99□□□□□ -1.61
CD28P10747 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CD28P10747 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CD28P10747 CFI-205ENST00000512148 1914 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
CD28P10747 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CD28P10747 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC4.99□□□□□ -1.61
CD28P10747 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
CD28P10747 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
CD28P10747 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CD28P10747 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC4.99□□□□□ -1.61
CD28P10747 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC4.99□□□□□ -1.61
CD28P10747 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CD28P10747 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CD28P10747 KCTD4-201ENST00000379108 1865 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
CD28P10747 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
CD28P10747 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
CD28P10747 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
CD28P10747 TMEM269-204ENST00000637012 3354 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
CD28P10747 IL31RA-201ENST00000297015 2695 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
CD28P10747 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CD28P10747 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CD28P10747 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CD28P10747 RNU1-46P-201ENST00000384425 164 ntBASIC4.99□□□□□ -1.61
CD28P10747 AC004386.1-201ENST00000393214 761 ntBASIC4.99□□□□□ -1.61
CD28P10747 SMARCE1P6-201ENST00000398372 1216 ntBASIC4.99□□□□□ -1.61
CD28P10747 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC4.99□□□□□ -1.61
CD28P10747 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC4.99□□□□□ -1.61
CD28P10747 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC4.99□□□□□ -1.61
CD28P10747 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC4.99□□□□□ -1.61
CD28P10747 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 91.2 ms