RNA–Protein interactions for RNA: ENST00000608506.5

LINC00635-219, long intergenic non-protein coding RNA 635, humanhuman

TSL 5 BASIC

Gene LINC00635, Length 482 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00635-219ENST00000608506 AEBP2Q6ZN18 517 aaPredicted RBP26.61■■□□□ 1.85
LINC00635-219ENST00000608506 CHIC1Q5VXU3 224 aa25.18■■□□□ 1.62
LINC00635-219ENST00000608506 SENP3Q9H4L4 574 aaPredicted RBP22.7■■□□□ 1.22
LINC00635-219ENST00000608506 PHF23Q9BUL5 403 aaPredicted RBP22.38■■□□□ 1.17
LINC00635-219ENST00000608506 FOXD1Q16676 465 aa21.16■□□□□ 0.98
LINC00635-219ENST00000608506 PLPPR3Q6T4P5 718 aa20.07■□□□□ 0.8
LINC00635-219ENST00000608506 MSH5O43196 834 aa19.84■□□□□ 0.77
LINC00635-219ENST00000608506 PIAS4Q8N2W9 510 aaPredicted RBP19.75■□□□□ 0.75
LINC00635-219ENST00000608506 PPP6R1Q9UPN7 881 aa19.72■□□□□ 0.75
LINC00635-219ENST00000608506 ADRA2BP18089 450 aa19.64■□□□□ 0.73
LINC00635-219ENST00000608506 POTEDQ86YR6 584 aa19.51■□□□□ 0.71
LINC00635-219ENST00000608506 MAPK8IP2Q13387 824 aaPredicted RBP18.06■□□□□ 0.48
LINC00635-219ENST00000608506 DMRT2Q9Y5R5 561 aa18■□□□□ 0.47
LINC00635-219ENST00000608506 SCAF1Q9H7N4 1312 aaKnown RBP17.95■□□□□ 0.46
LINC00635-219ENST00000608506 PPP4R3CPQ6ZMV5 832 aa17.57■□□□□ 0.4
LINC00635-219ENST00000608506 HOXD11P31277 338 aaPredicted RBP17.31■□□□□ 0.36
LINC00635-219ENST00000608506 CNKSR2Q8WXI2 1034 aa17.27■□□□□ 0.36
LINC00635-219ENST00000608506 DCAF8L1A6NGE4 600 aa17.19■□□□□ 0.34
LINC00635-219ENST00000608506 RNF216Q9NWF9 866 aaPredicted RBP17.14■□□□□ 0.33
LINC00635-219ENST00000608506 CACNB1Q02641 598 aaPredicted RBP17.04■□□□□ 0.32
LINC00635-219ENST00000608506 RNF39Q9H2S5 420 aa16.93■□□□□ 0.3
LINC00635-219ENST00000608506 NCBP3Q53F19 620 aaKnown RBP16.85■□□□□ 0.29
LINC00635-219ENST00000608506 DNAJC5BQ9UF47 199 aa16.75■□□□□ 0.27
LINC00635-219ENST00000608506 C1QBPQ07021 282 aaKnown RBP16.67■□□□□ 0.26
LINC00635-219ENST00000608506 NPM3O75607 178 aaKnown RBP16.64■□□□□ 0.25
LINC00635-219ENST00000608506 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.44■□□□□ 0.22
LINC00635-219ENST00000608506 KCNA4P22459 653 aa16.23■□□□□ 0.19
LINC00635-219ENST00000608506 U3KPZ7 1027 aaPredicted RBP16.13■□□□□ 0.17
LINC00635-219ENST00000608506 SLC4A2P04920 1241 aa15.92■□□□□ 0.14
LINC00635-219ENST00000608506 SPINK5Q9NQ38 1064 aaPredicted RBP15.91■□□□□ 0.14
LINC00635-219ENST00000608506 CAPN15O75808 1086 aa15.85■□□□□ 0.13
LINC00635-219ENST00000608506 DSG3P32926 999 aa15.83■□□□□ 0.12
LINC00635-219ENST00000608506 APLP2Q06481 763 aa15.64■□□□□ 0.09
LINC00635-219ENST00000608506 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.61■□□□□ 0.09
LINC00635-219ENST00000608506 HNRNPUL2Q1KMD3 747 aaKnown RBP15.61■□□□□ 0.09
LINC00635-219ENST00000608506 TRHP20396 242 aaPredicted RBP15.58■□□□□ 0.08
LINC00635-219ENST00000608506 ZNF219Q9P2Y4 722 aaPredicted RBP15.58■□□□□ 0.08
LINC00635-219ENST00000608506 SAMD1Q6SPF0 538 aaPredicted RBP15.52■□□□□ 0.08
LINC00635-219ENST00000608506 ABCB7O75027 752 aa15.49■□□□□ 0.07
LINC00635-219ENST00000608506 MYCNP04198 464 aaPredicted RBP15.4■□□□□ 0.06
LINC00635-219ENST00000608506 SLC4A1APQ9BWU0 796 aaKnown RBP15.29■□□□□ 0.04
LINC00635-219ENST00000608506 POTEHQ6S545 545 aa15.27■□□□□ 0.04
LINC00635-219ENST00000608506 NISCHQ9Y2I1 1504 aa15.22■□□□□ 0.03
LINC00635-219ENST00000608506 FOXD4L1Q9NU39 408 aa15.19■□□□□ 0.02
LINC00635-219ENST00000608506 POLA2Q14181 598 aa15.15■□□□□ 0.02
LINC00635-219ENST00000608506 RBM42Q9BTD8 480 aaKnown RBP15.1■□□□□ 0.01
LINC00635-219ENST00000608506 ATF5Q9Y2D1 282 aaPredicted RBP15.04■□□□□ -0
LINC00635-219ENST00000608506 ZBTB22O15209 634 aa14.94□□□□□ -0.02
LINC00635-219ENST00000608506 ZBTB12Q9Y330 459 aaPredicted RBP14.85□□□□□ -0.03
LINC00635-219ENST00000608506 CHRDL2Q6WN34 429 aa14.79□□□□□ -0.04
LINC00635-219ENST00000608506 ATXN8OSP0DMR3 200 aa14.73□□□□□ -0.05
LINC00635-219ENST00000608506 AKT1S1Q96B36 256 aa14.73□□□□□ -0.05
LINC00635-219ENST00000608506 OSCARQ8IYS5 282 aa14.69□□□□□ -0.06
LINC00635-219ENST00000608506 REM2Q8IYK8 340 aaPredicted RBP14.58□□□□□ -0.08
LINC00635-219ENST00000608506 PITPNM1O00562 1244 aa14.44□□□□□ -0.1
LINC00635-219ENST00000608506 FBLN2P98095 1184 aa14.43□□□□□ -0.1
LINC00635-219ENST00000608506 PIP4P2Q8N4L2 257 aa14.42□□□□□ -0.1
LINC00635-219ENST00000608506 SPDYE2BA6NHP3 402 aa14.4□□□□□ -0.1
LINC00635-219ENST00000608506 SPDYE6P0CI01 402 aa14.4□□□□□ -0.1
LINC00635-219ENST00000608506 SPDYE2Q495Y8 402 aa14.4□□□□□ -0.1
LINC00635-219ENST00000608506 MKRN4PQ13434 485 aaPredicted RBP14.35□□□□□ -0.11
LINC00635-219ENST00000608506 FXR2P51116 673 aaKnown RBP eCLIP14.34□□□□□ -0.11
LINC00635-219ENST00000608506 SP7Q8TDD2 431 aaPredicted RBP14.28□□□□□ -0.12
LINC00635-219ENST00000608506 SSUH2Q9Y2M2 353 aa14.21□□□□□ -0.13
LINC00635-219ENST00000608506 ZNF692Q9BU19 519 aaPredicted RBP14.18□□□□□ -0.14
LINC00635-219ENST00000608506 CSRNP3Q8WYN3 585 aa14.16□□□□□ -0.14
LINC00635-219ENST00000608506 HAX1O00165 279 aa14.15□□□□□ -0.14
LINC00635-219ENST00000608506 SPDYE1Q8NFV5 336 aaPredicted RBP14.15□□□□□ -0.14
LINC00635-219ENST00000608506 CLEC11AQ9Y240 323 aa14.11□□□□□ -0.15
LINC00635-219ENST00000608506 PRKAR2AP13861 404 aaKnown RBP14.05□□□□□ -0.16
LINC00635-219ENST00000608506 EVX2Q03828 476 aa14□□□□□ -0.17
LINC00635-219ENST00000608506 PABPN1Q86U42 306 aaKnown RBP eCLIP13.98□□□□□ -0.17
LINC00635-219ENST00000608506 EHMT2Q96KQ7 1210 aa13.96□□□□□ -0.17
LINC00635-219ENST00000608506 C19orf67A6NJJ6 358 aa13.89□□□□□ -0.19
LINC00635-219ENST00000608506 PRR29P0C7W0 189 aa13.87□□□□□ -0.19
LINC00635-219ENST00000608506 CHADLQ6NUI6 762 aa13.87□□□□□ -0.19
LINC00635-219ENST00000608506 GABBR2O75899 941 aa13.68□□□□□ -0.22
LINC00635-219ENST00000608506 FARP1Q9Y4F1 1045 aaPredicted RBP13.66□□□□□ -0.22
LINC00635-219ENST00000608506 SPDYE4A6NLX3 237 aa13.6□□□□□ -0.23
LINC00635-219ENST00000608506 CD44P16070 742 aaKnown RBP13.6□□□□□ -0.23
LINC00635-219ENST00000608506 STAG3Q9UJ98 1225 aa13.57□□□□□ -0.24
LINC00635-219ENST00000608506 CREBZFQ9NS37 354 aa13.54□□□□□ -0.24
LINC00635-219ENST00000608506 CCDC180Q9P1Z9 1646 aa13.53□□□□□ -0.24
LINC00635-219ENST00000608506 CLCN6P51797 869 aa13.45□□□□□ -0.26
LINC00635-219ENST00000608506 POTEIP0CG38 1075 aa13.41□□□□□ -0.26
LINC00635-219ENST00000608506 ZNF579Q8NAF0 562 aaKnown RBP13.41□□□□□ -0.26
LINC00635-219ENST00000608506 LHX8Q68G74 356 aa13.38□□□□□ -0.27
LINC00635-219ENST00000608506 ZRANB1Q9UGI0 708 aa13.38□□□□□ -0.27
LINC00635-219ENST00000608506 PROM2Q8N271 834 aa13.32□□□□□ -0.28
LINC00635-219ENST00000608506 MNX1P50219 401 aaPredicted RBP13.31□□□□□ -0.28
LINC00635-219ENST00000608506 DCBLD2Q96PD2 775 aa13.27□□□□□ -0.29
LINC00635-219ENST00000608506 NPM1P06748 294 aaKnown RBP eCLIP13.26□□□□□ -0.29
LINC00635-219ENST00000608506 PAK3O75914 559 aaPredicted RBP13.25□□□□□ -0.29
LINC00635-219ENST00000608506 GALR2O43603 387 aaPredicted RBP13.24□□□□□ -0.29
LINC00635-219ENST00000608506 PHF12Q96QT6 1004 aa13.2□□□□□ -0.3
LINC00635-219ENST00000608506 MS4A3Q96HJ5 214 aa13.04□□□□□ -0.32
LINC00635-219ENST00000608506 TSPYL2Q9H2G4 693 aaPredicted RBP13.01□□□□□ -0.33
LINC00635-219ENST00000608506 CCDC61Q9Y6R9 512 aa13□□□□□ -0.33
LINC00635-219ENST00000608506 PELP1Q8IZL8 1130 aaKnown RBP12.99□□□□□ -0.33
LINC00635-219ENST00000608506 ASTLQ6HA08 431 aaPredicted RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms