RNA–Protein interactions for RNA: ENST00000317735.4

RRH-201, Transcript of retinal pigment epithelium-derived rhodopsin homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRH, Length 1,455 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRH-201ENST00000317735 AEBP2Q6ZN18 517 aaPredicted RBP23.24■■□□□ 1.31
RRH-201ENST00000317735 CHIC1Q5VXU3 224 aa22.51■■□□□ 1.19
RRH-201ENST00000317735 PHF23Q9BUL5 403 aaPredicted RBP19.82■□□□□ 0.76
RRH-201ENST00000317735 SENP3Q9H4L4 574 aaPredicted RBP19.66■□□□□ 0.74
RRH-201ENST00000317735 FOXD1Q16676 465 aa18.32■□□□□ 0.52
RRH-201ENST00000317735 PLPPR3Q6T4P5 718 aa18.17■□□□□ 0.5
RRH-201ENST00000317735 PPP6R1Q9UPN7 881 aa17.54■□□□□ 0.4
RRH-201ENST00000317735 ADRA2BP18089 450 aa17.5■□□□□ 0.39
RRH-201ENST00000317735 PIAS4Q8N2W9 510 aaPredicted RBP17.2■□□□□ 0.34
RRH-201ENST00000317735 MSH5O43196 834 aa16.88■□□□□ 0.29
RRH-201ENST00000317735 PPP4R3CPQ6ZMV5 832 aa16.02■□□□□ 0.15
RRH-201ENST00000317735 MAPK8IP2Q13387 824 aaPredicted RBP15.93■□□□□ 0.14
RRH-201ENST00000317735 SCAF1Q9H7N4 1312 aaKnown RBP15.9■□□□□ 0.14
RRH-201ENST00000317735 DMRT2Q9Y5R5 561 aa15.7■□□□□ 0.1
RRH-201ENST00000317735 POTEDQ86YR6 584 aa15.68■□□□□ 0.1
RRH-201ENST00000317735 CNKSR2Q8WXI2 1034 aa15.59■□□□□ 0.09
RRH-201ENST00000317735 KCNA4P22459 653 aa15.52■□□□□ 0.07
RRH-201ENST00000317735 NCBP3Q53F19 620 aaKnown RBP15.5■□□□□ 0.07
RRH-201ENST00000317735 NPM3O75607 178 aaKnown RBP15.35■□□□□ 0.05
RRH-201ENST00000317735 HOXD11P31277 338 aaPredicted RBP15.32■□□□□ 0.04
RRH-201ENST00000317735 RNF216Q9NWF9 866 aaPredicted RBP15.32■□□□□ 0.04
RRH-201ENST00000317735 DCAF8L1A6NGE4 600 aa14.99□□□□□ -0.01
RRH-201ENST00000317735 DNAJC5BQ9UF47 199 aa14.91□□□□□ -0.02
RRH-201ENST00000317735 NISCHQ9Y2I1 1504 aa14.91□□□□□ -0.02
RRH-201ENST00000317735 SLC4A1APQ9BWU0 796 aaKnown RBP14.7□□□□□ -0.06
RRH-201ENST00000317735 SLC4A2P04920 1241 aa14.56□□□□□ -0.08
RRH-201ENST00000317735 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.56□□□□□ -0.08
RRH-201ENST00000317735 RNF39Q9H2S5 420 aa14.5□□□□□ -0.09
RRH-201ENST00000317735 U3KPZ7 1027 aaPredicted RBP14.37□□□□□ -0.11
RRH-201ENST00000317735 ZBTB22O15209 634 aa14.31□□□□□ -0.12
RRH-201ENST00000317735 FOXD4L1Q9NU39 408 aa14.28□□□□□ -0.12
RRH-201ENST00000317735 C1QBPQ07021 282 aaKnown RBP14.27□□□□□ -0.12
RRH-201ENST00000317735 CACNB1Q02641 598 aaPredicted RBP14.18□□□□□ -0.14
RRH-201ENST00000317735 MYCNP04198 464 aaPredicted RBP14.14□□□□□ -0.15
RRH-201ENST00000317735 EHMT2Q96KQ7 1210 aa14.14□□□□□ -0.15
RRH-201ENST00000317735 CSRNP3Q8WYN3 585 aa14.08□□□□□ -0.16
RRH-201ENST00000317735 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.04□□□□□ -0.16
RRH-201ENST00000317735 HNRNPUL2Q1KMD3 747 aaKnown RBP14.04□□□□□ -0.16
RRH-201ENST00000317735 SPINK5Q9NQ38 1064 aaPredicted RBP14.01□□□□□ -0.17
RRH-201ENST00000317735 SAMD1Q6SPF0 538 aaPredicted RBP14□□□□□ -0.17
RRH-201ENST00000317735 CAPN15O75808 1086 aa13.91□□□□□ -0.18
RRH-201ENST00000317735 APLP2Q06481 763 aa13.9□□□□□ -0.18
RRH-201ENST00000317735 ATF5Q9Y2D1 282 aaPredicted RBP13.86□□□□□ -0.19
RRH-201ENST00000317735 TRHP20396 242 aaPredicted RBP13.82□□□□□ -0.2
RRH-201ENST00000317735 ZNF219Q9P2Y4 722 aaPredicted RBP13.79□□□□□ -0.2
RRH-201ENST00000317735 ATXN8OSP0DMR3 200 aa13.78□□□□□ -0.2
RRH-201ENST00000317735 DSG3P32926 999 aa13.74□□□□□ -0.21
RRH-201ENST00000317735 ABCB7O75027 752 aa13.67□□□□□ -0.22
RRH-201ENST00000317735 POLA2Q14181 598 aa13.57□□□□□ -0.24
RRH-201ENST00000317735 ZBTB12Q9Y330 459 aaPredicted RBP13.28□□□□□ -0.28
RRH-201ENST00000317735 MKRN4PQ13434 485 aaPredicted RBP13.23□□□□□ -0.29
RRH-201ENST00000317735 CCDC180Q9P1Z9 1646 aa13.23□□□□□ -0.29
RRH-201ENST00000317735 FBLN2P98095 1184 aa13.17□□□□□ -0.3
RRH-201ENST00000317735 OSCARQ8IYS5 282 aa13.13□□□□□ -0.31
RRH-201ENST00000317735 ABCC9O60706 1549 aa13.04□□□□□ -0.32
RRH-201ENST00000317735 RBM42Q9BTD8 480 aaKnown RBP13.04□□□□□ -0.32
RRH-201ENST00000317735 SPDYE2BA6NHP3 402 aa12.94□□□□□ -0.34
RRH-201ENST00000317735 SPDYE6P0CI01 402 aa12.94□□□□□ -0.34
RRH-201ENST00000317735 SPDYE2Q495Y8 402 aa12.94□□□□□ -0.34
RRH-201ENST00000317735 AKT1S1Q96B36 256 aa12.87□□□□□ -0.35
RRH-201ENST00000317735 ZNF692Q9BU19 519 aaPredicted RBP12.87□□□□□ -0.35
RRH-201ENST00000317735 SSUH2Q9Y2M2 353 aa12.86□□□□□ -0.35
RRH-201ENST00000317735 SPDYE4A6NLX3 237 aa12.82□□□□□ -0.36
RRH-201ENST00000317735 REM2Q8IYK8 340 aaPredicted RBP12.78□□□□□ -0.36
RRH-201ENST00000317735 DCAF8L2P0C7V8 631 aa12.72□□□□□ -0.37
RRH-201ENST00000317735 PABPN1Q86U42 306 aaKnown RBP eCLIP12.72□□□□□ -0.37
RRH-201ENST00000317735 FKBP8Q14318 412 aa12.7□□□□□ -0.38
RRH-201ENST00000317735 PITPNM1O00562 1244 aa12.65□□□□□ -0.38
RRH-201ENST00000317735 PROM2Q8N271 834 aa12.62□□□□□ -0.39
RRH-201ENST00000317735 CHRDL2Q6WN34 429 aa12.59□□□□□ -0.39
RRH-201ENST00000317735 SPDYE1Q8NFV5 336 aaPredicted RBP12.59□□□□□ -0.39
RRH-201ENST00000317735 CLEC11AQ9Y240 323 aa12.55□□□□□ -0.4
RRH-201ENST00000317735 RB1CC1Q8TDY2 1594 aa12.51□□□□□ -0.41
RRH-201ENST00000317735 NACADO15069 1562 aa12.46□□□□□ -0.41
RRH-201ENST00000317735 FXR2P51116 673 aaKnown RBP eCLIP12.43□□□□□ -0.42
RRH-201ENST00000317735 PIP4P2Q8N4L2 257 aa12.43□□□□□ -0.42
RRH-201ENST00000317735 STAG3Q9UJ98 1225 aa12.42□□□□□ -0.42
RRH-201ENST00000317735 PRR29P0C7W0 189 aa12.4□□□□□ -0.42
RRH-201ENST00000317735 ZCCHC6Q5VYS8 1495 aaKnown RBP12.39□□□□□ -0.43
RRH-201ENST00000317735 POTEHQ6S545 545 aa12.37□□□□□ -0.43
RRH-201ENST00000317735 MYO15BQ96JP2 1530 aa12.32□□□□□ -0.44
RRH-201ENST00000317735 PRKAR2AP13861 404 aaKnown RBP12.3□□□□□ -0.44
RRH-201ENST00000317735 CHADLQ6NUI6 762 aa12.3□□□□□ -0.44
RRH-201ENST00000317735 DCAF1Q9Y4B6 1507 aa12.28□□□□□ -0.44
RRH-201ENST00000317735 CREBZFQ9NS37 354 aa12.27□□□□□ -0.45
RRH-201ENST00000317735 FBXO3Q9UK99 471 aa12.23□□□□□ -0.45
RRH-201ENST00000317735 UNC13AQ9UPW8 1703 aa12.17□□□□□ -0.46
RRH-201ENST00000317735 SCRIBQ14160 1630 aa12.15□□□□□ -0.46
RRH-201ENST00000317735 MIER1Q8N108 512 aa12.14□□□□□ -0.47
RRH-201ENST00000317735 FARP1Q9Y4F1 1045 aaPredicted RBP12.14□□□□□ -0.47
RRH-201ENST00000317735 MNX1P50219 401 aaPredicted RBP12.14□□□□□ -0.47
RRH-201ENST00000317735 VASPP50552 380 aaPredicted RBP12.12□□□□□ -0.47
RRH-201ENST00000317735 PLCD3Q8N3E9 789 aa12.1□□□□□ -0.47
RRH-201ENST00000317735 BICRAQ9NZM4 1560 aa12.04□□□□□ -0.48
RRH-201ENST00000317735 PLEKHG5O94827 1062 aa12.03□□□□□ -0.48
RRH-201ENST00000317735 HAX1O00165 279 aa12.02□□□□□ -0.48
RRH-201ENST00000317735 C19orf67A6NJJ6 358 aa12.02□□□□□ -0.49
RRH-201ENST00000317735 EVX2Q03828 476 aa11.99□□□□□ -0.49
RRH-201ENST00000317735 NPM1P06748 294 aaKnown RBP eCLIP11.98□□□□□ -0.49
RRH-201ENST00000317735 IFNLR1Q8IU57 520 aaPredicted RBP11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms