Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHGB3Q9Y5G1 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
PCDHGB3Q9Y5G1 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHGB3Q9Y5G1 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHGB3Q9Y5G1 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC18.75■□□□□ 0.59
PCDHGB3Q9Y5G1 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHGB3Q9Y5G1 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHGB3Q9Y5G1 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHGB3Q9Y5G1 MIPEPP3-201ENST00000412105 444 ntBASIC18.75■□□□□ 0.59
PCDHGB3Q9Y5G1 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC18.75■□□□□ 0.59
PCDHGB3Q9Y5G1 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHGB3Q9Y5G1 GCK-205ENST00000437084 1385 ntTSL 5 BASIC18.75■□□□□ 0.59
PCDHGB3Q9Y5G1 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHGB3Q9Y5G1 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHGB3Q9Y5G1 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHGB3Q9Y5G1 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC18.75■□□□□ 0.59
PCDHGB3Q9Y5G1 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHGB3Q9Y5G1 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
PCDHGB3Q9Y5G1 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHGB3Q9Y5G1 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHGB3Q9Y5G1 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC18.74■□□□□ 0.59
PCDHGB3Q9Y5G1 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
PCDHGB3Q9Y5G1 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.74■□□□□ 0.59
PCDHGB3Q9Y5G1 AL158211.5-201ENST00000623583 2518 ntBASIC18.74■□□□□ 0.59
PCDHGB3Q9Y5G1 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHGB3Q9Y5G1 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
PCDHGB3Q9Y5G1 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC18.74■□□□□ 0.59
PCDHGB3Q9Y5G1 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC18.74■□□□□ 0.59
PCDHGB3Q9Y5G1 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC18.74■□□□□ 0.59
PCDHGB3Q9Y5G1 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHGB3Q9Y5G1 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHGB3Q9Y5G1 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
PCDHGB3Q9Y5G1 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC18.74■□□□□ 0.59
PCDHGB3Q9Y5G1 CYP2T3P-201ENST00000601990 817 ntBASIC18.74■□□□□ 0.59
PCDHGB3Q9Y5G1 AC105020.6-201ENST00000621523 1217 ntBASIC18.74■□□□□ 0.59
PCDHGB3Q9Y5G1 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHGB3Q9Y5G1 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
PCDHGB3Q9Y5G1 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC18.74■□□□□ 0.59
PCDHGB3Q9Y5G1 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHGB3Q9Y5G1 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC18.74■□□□□ 0.59
PCDHGB3Q9Y5G1 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHGB3Q9Y5G1 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHGB3Q9Y5G1 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHGB3Q9Y5G1 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHGB3Q9Y5G1 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHGB3Q9Y5G1 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHGB3Q9Y5G1 STK25-205ENST00000405883 1904 ntTSL 2 BASIC18.73■□□□□ 0.59
PCDHGB3Q9Y5G1 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC18.73■□□□□ 0.59
PCDHGB3Q9Y5G1 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
PCDHGB3Q9Y5G1 HES2-205ENST00000487437 968 ntTSL 3 BASIC18.73■□□□□ 0.59
PCDHGB3Q9Y5G1 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC18.73■□□□□ 0.59
PCDHGB3Q9Y5G1 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC18.73■□□□□ 0.59
PCDHGB3Q9Y5G1 AL589743.5-201ENST00000616611 1050 ntBASIC18.73■□□□□ 0.59
PCDHGB3Q9Y5G1 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
PCDHGB3Q9Y5G1 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC18.73■□□□□ 0.59
PCDHGB3Q9Y5G1 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHGB3Q9Y5G1 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.73■□□□□ 0.59
PCDHGB3Q9Y5G1 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
PCDHGB3Q9Y5G1 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
PCDHGB3Q9Y5G1 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHGB3Q9Y5G1 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHGB3Q9Y5G1 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC18.73■□□□□ 0.59
PCDHGB3Q9Y5G1 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC18.72■□□□□ 0.59
PCDHGB3Q9Y5G1 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.72■□□□□ 0.59
PCDHGB3Q9Y5G1 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHGB3Q9Y5G1 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHGB3Q9Y5G1 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHGB3Q9Y5G1 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHGB3Q9Y5G1 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHGB3Q9Y5G1 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHGB3Q9Y5G1 ABHD17AP1-201ENST00000358206 933 ntBASIC18.72■□□□□ 0.59
PCDHGB3Q9Y5G1 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC18.72■□□□□ 0.59
PCDHGB3Q9Y5G1 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHGB3Q9Y5G1 KLF13-207ENST00000560473 489 ntTSL 3 BASIC18.72■□□□□ 0.59
PCDHGB3Q9Y5G1 AC010980.2-201ENST00000587099 1412 ntBASIC18.72■□□□□ 0.59
PCDHGB3Q9Y5G1 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHGB3Q9Y5G1 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHGB3Q9Y5G1 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHGB3Q9Y5G1 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHGB3Q9Y5G1 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHGB3Q9Y5G1 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHGB3Q9Y5G1 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHGB3Q9Y5G1 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.72■□□□□ 0.59
PCDHGB3Q9Y5G1 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
PCDHGB3Q9Y5G1 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
PCDHGB3Q9Y5G1 TMEM179-206ENST00000616017 1645 ntBASIC18.71■□□□□ 0.59
PCDHGB3Q9Y5G1 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHGB3Q9Y5G1 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHGB3Q9Y5G1 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHGB3Q9Y5G1 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC18.71■□□□□ 0.59
PCDHGB3Q9Y5G1 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHGB3Q9Y5G1 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHGB3Q9Y5G1 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHGB3Q9Y5G1 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHGB3Q9Y5G1 PPP1R14BP2-201ENST00000426284 444 ntBASIC18.71■□□□□ 0.59
PCDHGB3Q9Y5G1 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC18.71■□□□□ 0.59
PCDHGB3Q9Y5G1 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
PCDHGB3Q9Y5G1 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC18.71■□□□□ 0.59
PCDHGB3Q9Y5G1 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHGB3Q9Y5G1 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms