Protein–RNA interactions for Protein: Q9Y5E1

PCDHB9, Protocadherin beta-9, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9Q9Y5E1 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHB9Q9Y5E1 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC20.12■□□□□ 0.81
PCDHB9Q9Y5E1 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHB9Q9Y5E1 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHB9Q9Y5E1 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.12■□□□□ 0.81
PCDHB9Q9Y5E1 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHB9Q9Y5E1 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.12■□□□□ 0.81
PCDHB9Q9Y5E1 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHB9Q9Y5E1 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC20.12■□□□□ 0.81
PCDHB9Q9Y5E1 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.12■□□□□ 0.81
PCDHB9Q9Y5E1 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHB9Q9Y5E1 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.12■□□□□ 0.81
PCDHB9Q9Y5E1 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHB9Q9Y5E1 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCDHB9Q9Y5E1 KRT16P6-202ENST00000425692 1426 ntBASIC20.11■□□□□ 0.81
PCDHB9Q9Y5E1 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.11■□□□□ 0.81
PCDHB9Q9Y5E1 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCDHB9Q9Y5E1 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
PCDHB9Q9Y5E1 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCDHB9Q9Y5E1 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
PCDHB9Q9Y5E1 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC20.11■□□□□ 0.81
PCDHB9Q9Y5E1 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC20.11■□□□□ 0.81
PCDHB9Q9Y5E1 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC20.11■□□□□ 0.81
PCDHB9Q9Y5E1 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC20.11■□□□□ 0.81
PCDHB9Q9Y5E1 KLF2-202ENST00000592003 564 ntTSL 3 BASIC20.11■□□□□ 0.81
PCDHB9Q9Y5E1 AC120498.8-201ENST00000614275 531 ntBASIC20.11■□□□□ 0.81
PCDHB9Q9Y5E1 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCDHB9Q9Y5E1 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCDHB9Q9Y5E1 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCDHB9Q9Y5E1 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PCDHB9Q9Y5E1 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
PCDHB9Q9Y5E1 BX119927.1-201ENST00000636596 1552 ntBASIC20.11■□□□□ 0.81
PCDHB9Q9Y5E1 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PCDHB9Q9Y5E1 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCDHB9Q9Y5E1 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PCDHB9Q9Y5E1 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
PCDHB9Q9Y5E1 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PCDHB9Q9Y5E1 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
PCDHB9Q9Y5E1 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC20.1■□□□□ 0.81
PCDHB9Q9Y5E1 AL135905.2-201ENST00000584934 1404 ntBASIC20.1■□□□□ 0.81
PCDHB9Q9Y5E1 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.1■□□□□ 0.81
PCDHB9Q9Y5E1 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PCDHB9Q9Y5E1 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PCDHB9Q9Y5E1 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PCDHB9Q9Y5E1 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PCDHB9Q9Y5E1 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.1■□□□□ 0.81
PCDHB9Q9Y5E1 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PCDHB9Q9Y5E1 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC20.1■□□□□ 0.81
PCDHB9Q9Y5E1 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC20.1■□□□□ 0.81
PCDHB9Q9Y5E1 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC20.1■□□□□ 0.81
PCDHB9Q9Y5E1 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PCDHB9Q9Y5E1 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC20.1■□□□□ 0.81
PCDHB9Q9Y5E1 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
PCDHB9Q9Y5E1 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC20.1■□□□□ 0.81
PCDHB9Q9Y5E1 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
PCDHB9Q9Y5E1 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PCDHB9Q9Y5E1 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC20.1■□□□□ 0.81
PCDHB9Q9Y5E1 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PCDHB9Q9Y5E1 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC20.1■□□□□ 0.81
PCDHB9Q9Y5E1 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
PCDHB9Q9Y5E1 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC20.1■□□□□ 0.81
PCDHB9Q9Y5E1 MIR4785-201ENST00000585005 73 ntBASIC20.1■□□□□ 0.81
PCDHB9Q9Y5E1 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20.1■□□□□ 0.81
PCDHB9Q9Y5E1 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
PCDHB9Q9Y5E1 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PCDHB9Q9Y5E1 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PCDHB9Q9Y5E1 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PCDHB9Q9Y5E1 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
PCDHB9Q9Y5E1 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
PCDHB9Q9Y5E1 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
PCDHB9Q9Y5E1 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHB9Q9Y5E1 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
PCDHB9Q9Y5E1 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHB9Q9Y5E1 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.09■□□□□ 0.81
PCDHB9Q9Y5E1 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC20.09■□□□□ 0.81
PCDHB9Q9Y5E1 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
PCDHB9Q9Y5E1 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
PCDHB9Q9Y5E1 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHB9Q9Y5E1 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHB9Q9Y5E1 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHB9Q9Y5E1 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC20.09■□□□□ 0.81
PCDHB9Q9Y5E1 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC20.09■□□□□ 0.81
PCDHB9Q9Y5E1 DHDH-203ENST00000522614 776 ntTSL 5 BASIC20.09■□□□□ 0.81
PCDHB9Q9Y5E1 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC20.09■□□□□ 0.81
PCDHB9Q9Y5E1 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC20.09■□□□□ 0.81
PCDHB9Q9Y5E1 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHB9Q9Y5E1 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHB9Q9Y5E1 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHB9Q9Y5E1 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHB9Q9Y5E1 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC20.09■□□□□ 0.81
PCDHB9Q9Y5E1 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
PCDHB9Q9Y5E1 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHB9Q9Y5E1 AC099778.1-201ENST00000568593 1911 ntBASIC20.09■□□□□ 0.81
PCDHB9Q9Y5E1 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.09■□□□□ 0.81
PCDHB9Q9Y5E1 AC124283.5-201ENST00000624661 1809 ntBASIC20.09■□□□□ 0.81
PCDHB9Q9Y5E1 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
PCDHB9Q9Y5E1 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
PCDHB9Q9Y5E1 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PCDHB9Q9Y5E1 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PCDHB9Q9Y5E1 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC20.08■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms