Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 AC124283.5-201ENST00000624661 1809 ntBASIC18.12■□□□□ 0.49
RPH3AQ9Y2J0 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
RPH3AQ9Y2J0 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.12■□□□□ 0.49
RPH3AQ9Y2J0 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RPH3AQ9Y2J0 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
RPH3AQ9Y2J0 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
RPH3AQ9Y2J0 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC18.12■□□□□ 0.49
RPH3AQ9Y2J0 AL512408.1-201ENST00000569378 2000 ntBASIC18.12■□□□□ 0.49
RPH3AQ9Y2J0 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RPH3AQ9Y2J0 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RPH3AQ9Y2J0 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC18.12■□□□□ 0.49
RPH3AQ9Y2J0 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
RPH3AQ9Y2J0 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC18.12■□□□□ 0.49
RPH3AQ9Y2J0 IRX5-204ENST00000560154 879 ntTSL 5 BASIC18.12■□□□□ 0.49
RPH3AQ9Y2J0 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RPH3AQ9Y2J0 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC18.12■□□□□ 0.49
RPH3AQ9Y2J0 KLF2-202ENST00000592003 564 ntTSL 3 BASIC18.12■□□□□ 0.49
RPH3AQ9Y2J0 AC120498.8-201ENST00000614275 531 ntBASIC18.12■□□□□ 0.49
RPH3AQ9Y2J0 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RPH3AQ9Y2J0 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RPH3AQ9Y2J0 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
RPH3AQ9Y2J0 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RPH3AQ9Y2J0 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RPH3AQ9Y2J0 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RPH3AQ9Y2J0 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
RPH3AQ9Y2J0 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18.12■□□□□ 0.49
RPH3AQ9Y2J0 AL162377.1-201ENST00000618844 1793 ntBASIC18.12■□□□□ 0.49
RPH3AQ9Y2J0 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC18.12■□□□□ 0.49
RPH3AQ9Y2J0 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RPH3AQ9Y2J0 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RPH3AQ9Y2J0 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC18.11■□□□□ 0.49
RPH3AQ9Y2J0 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.11■□□□□ 0.49
RPH3AQ9Y2J0 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.11■□□□□ 0.49
RPH3AQ9Y2J0 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
RPH3AQ9Y2J0 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18.11■□□□□ 0.49
RPH3AQ9Y2J0 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RPH3AQ9Y2J0 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
RPH3AQ9Y2J0 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC18.11■□□□□ 0.49
RPH3AQ9Y2J0 POM121L13P-201ENST00000422362 380 ntBASIC18.11■□□□□ 0.49
RPH3AQ9Y2J0 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC18.11■□□□□ 0.49
RPH3AQ9Y2J0 THEM4-205ENST00000489410 643 ntTSL 2 BASIC18.11■□□□□ 0.49
RPH3AQ9Y2J0 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC18.11■□□□□ 0.49
RPH3AQ9Y2J0 AC233263.1-201ENST00000578059 224 ntBASIC18.11■□□□□ 0.49
RPH3AQ9Y2J0 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RPH3AQ9Y2J0 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
RPH3AQ9Y2J0 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
RPH3AQ9Y2J0 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC18.11■□□□□ 0.49
RPH3AQ9Y2J0 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RPH3AQ9Y2J0 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RPH3AQ9Y2J0 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC18.11■□□□□ 0.49
RPH3AQ9Y2J0 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RPH3AQ9Y2J0 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RPH3AQ9Y2J0 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC18.11■□□□□ 0.49
RPH3AQ9Y2J0 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
RPH3AQ9Y2J0 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
RPH3AQ9Y2J0 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC18.1■□□□□ 0.49
RPH3AQ9Y2J0 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RPH3AQ9Y2J0 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RPH3AQ9Y2J0 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
RPH3AQ9Y2J0 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC18.1■□□□□ 0.49
RPH3AQ9Y2J0 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
RPH3AQ9Y2J0 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC18.1■□□□□ 0.49
RPH3AQ9Y2J0 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RPH3AQ9Y2J0 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RPH3AQ9Y2J0 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
RPH3AQ9Y2J0 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
RPH3AQ9Y2J0 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RPH3AQ9Y2J0 BAALC-201ENST00000297574 801 ntTSL 3 BASIC18.1■□□□□ 0.49
RPH3AQ9Y2J0 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RPH3AQ9Y2J0 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC18.1■□□□□ 0.49
RPH3AQ9Y2J0 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
RPH3AQ9Y2J0 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
RPH3AQ9Y2J0 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC18.1■□□□□ 0.49
RPH3AQ9Y2J0 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC18.1■□□□□ 0.49
RPH3AQ9Y2J0 CBFB-203ENST00000561924 584 ntTSL 5 BASIC18.1■□□□□ 0.49
RPH3AQ9Y2J0 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC18.1■□□□□ 0.49
RPH3AQ9Y2J0 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
RPH3AQ9Y2J0 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
RPH3AQ9Y2J0 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
RPH3AQ9Y2J0 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RPH3AQ9Y2J0 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RPH3AQ9Y2J0 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RPH3AQ9Y2J0 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
RPH3AQ9Y2J0 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RPH3AQ9Y2J0 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RPH3AQ9Y2J0 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
RPH3AQ9Y2J0 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RPH3AQ9Y2J0 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
RPH3AQ9Y2J0 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC18.09■□□□□ 0.49
RPH3AQ9Y2J0 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RPH3AQ9Y2J0 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RPH3AQ9Y2J0 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
RPH3AQ9Y2J0 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RPH3AQ9Y2J0 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RPH3AQ9Y2J0 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
RPH3AQ9Y2J0 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC18.09■□□□□ 0.49
RPH3AQ9Y2J0 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC18.09■□□□□ 0.49
RPH3AQ9Y2J0 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC18.09■□□□□ 0.49
RPH3AQ9Y2J0 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RPH3AQ9Y2J0 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms