Protein–RNA interactions for Protein: Q9UBL6

CPNE7, Copine-7, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7Q9UBL6 AC113410.3-201ENST00000623366 203 ntBASIC19.22■□□□□ 0.67
CPNE7Q9UBL6 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.22■□□□□ 0.67
CPNE7Q9UBL6 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CPNE7Q9UBL6 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CPNE7Q9UBL6 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC19.22■□□□□ 0.67
CPNE7Q9UBL6 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC19.22■□□□□ 0.67
CPNE7Q9UBL6 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC19.22■□□□□ 0.67
CPNE7Q9UBL6 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CPNE7Q9UBL6 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
CPNE7Q9UBL6 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
CPNE7Q9UBL6 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CPNE7Q9UBL6 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CPNE7Q9UBL6 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CPNE7Q9UBL6 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CPNE7Q9UBL6 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CPNE7Q9UBL6 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
CPNE7Q9UBL6 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CPNE7Q9UBL6 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CPNE7Q9UBL6 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CPNE7Q9UBL6 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC19.21■□□□□ 0.67
CPNE7Q9UBL6 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
CPNE7Q9UBL6 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
CPNE7Q9UBL6 AF186192.3-201ENST00000583427 947 ntBASIC19.21■□□□□ 0.67
CPNE7Q9UBL6 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC19.21■□□□□ 0.67
CPNE7Q9UBL6 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC19.21■□□□□ 0.67
CPNE7Q9UBL6 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC19.21■□□□□ 0.67
CPNE7Q9UBL6 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
CPNE7Q9UBL6 BX119927.1-201ENST00000636596 1552 ntBASIC19.21■□□□□ 0.67
CPNE7Q9UBL6 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CPNE7Q9UBL6 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC19.21■□□□□ 0.67
CPNE7Q9UBL6 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.21■□□□□ 0.67
CPNE7Q9UBL6 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CPNE7Q9UBL6 AP005212.1-201ENST00000581547 1997 ntBASIC19.21■□□□□ 0.67
CPNE7Q9UBL6 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
CPNE7Q9UBL6 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CPNE7Q9UBL6 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.2■□□□□ 0.66
CPNE7Q9UBL6 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CPNE7Q9UBL6 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC19.2■□□□□ 0.66
CPNE7Q9UBL6 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC19.2■□□□□ 0.66
CPNE7Q9UBL6 RPS15-203ENST00000586096 570 ntTSL 2 BASIC19.2■□□□□ 0.66
CPNE7Q9UBL6 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC19.2■□□□□ 0.66
CPNE7Q9UBL6 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CPNE7Q9UBL6 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC19.2■□□□□ 0.66
CPNE7Q9UBL6 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
CPNE7Q9UBL6 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CPNE7Q9UBL6 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
CPNE7Q9UBL6 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CPNE7Q9UBL6 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CPNE7Q9UBL6 KRT17P2-201ENST00000300992 1314 ntBASIC19.2■□□□□ 0.66
CPNE7Q9UBL6 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CPNE7Q9UBL6 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CPNE7Q9UBL6 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC19.2■□□□□ 0.66
CPNE7Q9UBL6 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CPNE7Q9UBL6 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.2■□□□□ 0.66
CPNE7Q9UBL6 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CPNE7Q9UBL6 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CPNE7Q9UBL6 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CPNE7Q9UBL6 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CPNE7Q9UBL6 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CPNE7Q9UBL6 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC19.19■□□□□ 0.66
CPNE7Q9UBL6 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
CPNE7Q9UBL6 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CPNE7Q9UBL6 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
CPNE7Q9UBL6 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC19.19■□□□□ 0.66
CPNE7Q9UBL6 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC19.19■□□□□ 0.66
CPNE7Q9UBL6 SAPCD2P4-201ENST00000424595 1171 ntBASIC19.19■□□□□ 0.66
CPNE7Q9UBL6 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC19.19■□□□□ 0.66
CPNE7Q9UBL6 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC19.19■□□□□ 0.66
CPNE7Q9UBL6 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC19.19■□□□□ 0.66
CPNE7Q9UBL6 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CPNE7Q9UBL6 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC19.19■□□□□ 0.66
CPNE7Q9UBL6 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC19.19■□□□□ 0.66
CPNE7Q9UBL6 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC19.19■□□□□ 0.66
CPNE7Q9UBL6 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CPNE7Q9UBL6 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CPNE7Q9UBL6 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CPNE7Q9UBL6 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CPNE7Q9UBL6 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CPNE7Q9UBL6 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.19■□□□□ 0.66
CPNE7Q9UBL6 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CPNE7Q9UBL6 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CPNE7Q9UBL6 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CPNE7Q9UBL6 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CPNE7Q9UBL6 CD37-204ENST00000535669 1674 ntTSL 2 BASIC19.18■□□□□ 0.66
CPNE7Q9UBL6 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CPNE7Q9UBL6 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CPNE7Q9UBL6 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
CPNE7Q9UBL6 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC19.18■□□□□ 0.66
CPNE7Q9UBL6 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC19.18■□□□□ 0.66
CPNE7Q9UBL6 PENK-204ENST00000518770 863 ntTSL 2 BASIC19.18■□□□□ 0.66
CPNE7Q9UBL6 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC19.18■□□□□ 0.66
CPNE7Q9UBL6 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC19.18■□□□□ 0.66
CPNE7Q9UBL6 MIR4785-201ENST00000585005 73 ntBASIC19.18■□□□□ 0.66
CPNE7Q9UBL6 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
CPNE7Q9UBL6 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC19.18■□□□□ 0.66
CPNE7Q9UBL6 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC19.18■□□□□ 0.66
CPNE7Q9UBL6 FEM1AP1-201ENST00000431297 1995 ntBASIC19.18■□□□□ 0.66
CPNE7Q9UBL6 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CPNE7Q9UBL6 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
CPNE7Q9UBL6 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms