Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NDE1Q9NXR1 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NDE1Q9NXR1 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
NDE1Q9NXR1 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NDE1Q9NXR1 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NDE1Q9NXR1 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
NDE1Q9NXR1 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NDE1Q9NXR1 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
NDE1Q9NXR1 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
NDE1Q9NXR1 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
NDE1Q9NXR1 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC19.12■□□□□ 0.65
NDE1Q9NXR1 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC19.12■□□□□ 0.65
NDE1Q9NXR1 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
NDE1Q9NXR1 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
NDE1Q9NXR1 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC19.12■□□□□ 0.65
NDE1Q9NXR1 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC19.12■□□□□ 0.65
NDE1Q9NXR1 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NDE1Q9NXR1 AC079598.2-202ENST00000546624 1451 ntBASIC19.12■□□□□ 0.65
NDE1Q9NXR1 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
NDE1Q9NXR1 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NDE1Q9NXR1 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC19.12■□□□□ 0.65
NDE1Q9NXR1 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC19.12■□□□□ 0.65
NDE1Q9NXR1 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC19.12■□□□□ 0.65
NDE1Q9NXR1 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
NDE1Q9NXR1 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
NDE1Q9NXR1 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
NDE1Q9NXR1 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
NDE1Q9NXR1 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
NDE1Q9NXR1 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NDE1Q9NXR1 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NDE1Q9NXR1 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
NDE1Q9NXR1 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
NDE1Q9NXR1 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
NDE1Q9NXR1 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NDE1Q9NXR1 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NDE1Q9NXR1 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NDE1Q9NXR1 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
NDE1Q9NXR1 TSPY26P-201ENST00000476365 1326 ntBASIC19.11■□□□□ 0.65
NDE1Q9NXR1 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NDE1Q9NXR1 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NDE1Q9NXR1 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NDE1Q9NXR1 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC19.11■□□□□ 0.65
NDE1Q9NXR1 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
NDE1Q9NXR1 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC19.11■□□□□ 0.65
NDE1Q9NXR1 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC19.11■□□□□ 0.65
NDE1Q9NXR1 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NDE1Q9NXR1 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
NDE1Q9NXR1 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
NDE1Q9NXR1 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC19.11■□□□□ 0.65
NDE1Q9NXR1 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
NDE1Q9NXR1 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
NDE1Q9NXR1 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC19.11■□□□□ 0.65
NDE1Q9NXR1 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC19.11■□□□□ 0.65
NDE1Q9NXR1 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
NDE1Q9NXR1 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC19.11■□□□□ 0.65
NDE1Q9NXR1 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
NDE1Q9NXR1 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
NDE1Q9NXR1 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NDE1Q9NXR1 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NDE1Q9NXR1 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
NDE1Q9NXR1 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC19.1■□□□□ 0.65
NDE1Q9NXR1 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
NDE1Q9NXR1 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
NDE1Q9NXR1 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC19.1■□□□□ 0.65
NDE1Q9NXR1 MPST-204ENST00000404393 1329 ntTSL 5 BASIC19.1■□□□□ 0.65
NDE1Q9NXR1 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
NDE1Q9NXR1 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NDE1Q9NXR1 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC19.1■□□□□ 0.65
NDE1Q9NXR1 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NDE1Q9NXR1 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC19.1■□□□□ 0.65
NDE1Q9NXR1 AC138907.5-202ENST00000569484 235 ntBASIC19.1■□□□□ 0.65
NDE1Q9NXR1 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC19.1■□□□□ 0.65
NDE1Q9NXR1 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NDE1Q9NXR1 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC19.1■□□□□ 0.65
NDE1Q9NXR1 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
NDE1Q9NXR1 AL032819.2-201ENST00000624543 2162 ntBASIC19.1■□□□□ 0.65
NDE1Q9NXR1 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.1■□□□□ 0.65
NDE1Q9NXR1 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
NDE1Q9NXR1 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NDE1Q9NXR1 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
NDE1Q9NXR1 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
NDE1Q9NXR1 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
NDE1Q9NXR1 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NDE1Q9NXR1 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NDE1Q9NXR1 STK25-205ENST00000405883 1904 ntTSL 2 BASIC19.1■□□□□ 0.65
NDE1Q9NXR1 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
NDE1Q9NXR1 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NDE1Q9NXR1 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
NDE1Q9NXR1 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NDE1Q9NXR1 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NDE1Q9NXR1 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC19.09■□□□□ 0.65
NDE1Q9NXR1 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
NDE1Q9NXR1 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
NDE1Q9NXR1 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NDE1Q9NXR1 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC19.09■□□□□ 0.65
NDE1Q9NXR1 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC19.09■□□□□ 0.65
NDE1Q9NXR1 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NDE1Q9NXR1 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC19.09■□□□□ 0.65
NDE1Q9NXR1 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC19.09■□□□□ 0.65
NDE1Q9NXR1 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms