Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NDE1Q9NXR1 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NDE1Q9NXR1 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
NDE1Q9NXR1 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NDE1Q9NXR1 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NDE1Q9NXR1 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
NDE1Q9NXR1 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NDE1Q9NXR1 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
NDE1Q9NXR1 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
NDE1Q9NXR1 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
NDE1Q9NXR1 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC19.12■□□□□ 0.65
NDE1Q9NXR1 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC19.12■□□□□ 0.65
NDE1Q9NXR1 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
NDE1Q9NXR1 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
NDE1Q9NXR1 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC19.12■□□□□ 0.65
NDE1Q9NXR1 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC19.12■□□□□ 0.65
NDE1Q9NXR1 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NDE1Q9NXR1 AC079598.2-202ENST00000546624 1451 ntBASIC19.12■□□□□ 0.65
NDE1Q9NXR1 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
NDE1Q9NXR1 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NDE1Q9NXR1 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC19.12■□□□□ 0.65
NDE1Q9NXR1 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC19.12■□□□□ 0.65
NDE1Q9NXR1 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC19.12■□□□□ 0.65
NDE1Q9NXR1 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
NDE1Q9NXR1 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
NDE1Q9NXR1 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
NDE1Q9NXR1 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
NDE1Q9NXR1 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
NDE1Q9NXR1 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NDE1Q9NXR1 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NDE1Q9NXR1 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
NDE1Q9NXR1 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
NDE1Q9NXR1 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
NDE1Q9NXR1 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NDE1Q9NXR1 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NDE1Q9NXR1 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NDE1Q9NXR1 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
NDE1Q9NXR1 TSPY26P-201ENST00000476365 1326 ntBASIC19.11■□□□□ 0.65
NDE1Q9NXR1 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NDE1Q9NXR1 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NDE1Q9NXR1 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NDE1Q9NXR1 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC19.11■□□□□ 0.65
NDE1Q9NXR1 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
NDE1Q9NXR1 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC19.11■□□□□ 0.65
NDE1Q9NXR1 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC19.11■□□□□ 0.65
NDE1Q9NXR1 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NDE1Q9NXR1 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
NDE1Q9NXR1 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
NDE1Q9NXR1 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC19.11■□□□□ 0.65
NDE1Q9NXR1 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
NDE1Q9NXR1 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
NDE1Q9NXR1 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC19.11■□□□□ 0.65
NDE1Q9NXR1 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC19.11■□□□□ 0.65
NDE1Q9NXR1 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
NDE1Q9NXR1 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC19.11■□□□□ 0.65
NDE1Q9NXR1 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
NDE1Q9NXR1 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
NDE1Q9NXR1 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NDE1Q9NXR1 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NDE1Q9NXR1 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
NDE1Q9NXR1 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC19.1■□□□□ 0.65
NDE1Q9NXR1 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
NDE1Q9NXR1 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
NDE1Q9NXR1 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC19.1■□□□□ 0.65
NDE1Q9NXR1 MPST-204ENST00000404393 1329 ntTSL 5 BASIC19.1■□□□□ 0.65
NDE1Q9NXR1 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
NDE1Q9NXR1 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NDE1Q9NXR1 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC19.1■□□□□ 0.65
NDE1Q9NXR1 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NDE1Q9NXR1 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC19.1■□□□□ 0.65
NDE1Q9NXR1 AC138907.5-202ENST00000569484 235 ntBASIC19.1■□□□□ 0.65
NDE1Q9NXR1 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC19.1■□□□□ 0.65
NDE1Q9NXR1 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NDE1Q9NXR1 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC19.1■□□□□ 0.65
NDE1Q9NXR1 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
NDE1Q9NXR1 AL032819.2-201ENST00000624543 2162 ntBASIC19.1■□□□□ 0.65
NDE1Q9NXR1 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.1■□□□□ 0.65
NDE1Q9NXR1 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
NDE1Q9NXR1 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NDE1Q9NXR1 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
NDE1Q9NXR1 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
NDE1Q9NXR1 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
NDE1Q9NXR1 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NDE1Q9NXR1 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NDE1Q9NXR1 STK25-205ENST00000405883 1904 ntTSL 2 BASIC19.1■□□□□ 0.65
NDE1Q9NXR1 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
NDE1Q9NXR1 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NDE1Q9NXR1 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
NDE1Q9NXR1 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NDE1Q9NXR1 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NDE1Q9NXR1 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC19.09■□□□□ 0.65
NDE1Q9NXR1 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
NDE1Q9NXR1 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
NDE1Q9NXR1 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NDE1Q9NXR1 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC19.09■□□□□ 0.65
NDE1Q9NXR1 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC19.09■□□□□ 0.65
NDE1Q9NXR1 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NDE1Q9NXR1 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC19.09■□□□□ 0.65
NDE1Q9NXR1 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC19.09■□□□□ 0.65
NDE1Q9NXR1 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 62.9 ms