Protein–RNA interactions for Protein: Q9HBG4

ATP6V0A4, V-type proton ATPase 116 kDa subunit a isoform 4, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A4Q9HBG4 AL162377.1-201ENST00000618844 1793 ntBASIC22.02■■□□□ 1.11
ATP6V0A4Q9HBG4 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
ATP6V0A4Q9HBG4 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC22.01■■□□□ 1.11
ATP6V0A4Q9HBG4 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
ATP6V0A4Q9HBG4 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC22.01■■□□□ 1.11
ATP6V0A4Q9HBG4 KRASP1-201ENST00000407852 552 ntBASIC22.01■■□□□ 1.11
ATP6V0A4Q9HBG4 AC012618.2-201ENST00000428058 849 ntBASIC22.01■■□□□ 1.11
ATP6V0A4Q9HBG4 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC22.01■■□□□ 1.11
ATP6V0A4Q9HBG4 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC22.01■■□□□ 1.11
ATP6V0A4Q9HBG4 TK2-204ENST00000525974 1178 ntTSL 2 BASIC22.01■■□□□ 1.11
ATP6V0A4Q9HBG4 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC22.01■■□□□ 1.11
ATP6V0A4Q9HBG4 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC22.01■■□□□ 1.11
ATP6V0A4Q9HBG4 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
ATP6V0A4Q9HBG4 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC22.01■■□□□ 1.11
ATP6V0A4Q9HBG4 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
ATP6V0A4Q9HBG4 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC22.01■■□□□ 1.11
ATP6V0A4Q9HBG4 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC22.01■■□□□ 1.11
ATP6V0A4Q9HBG4 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC22■■□□□ 1.11
ATP6V0A4Q9HBG4 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
ATP6V0A4Q9HBG4 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC22■■□□□ 1.11
ATP6V0A4Q9HBG4 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
ATP6V0A4Q9HBG4 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC22■■□□□ 1.11
ATP6V0A4Q9HBG4 STK25-204ENST00000405585 1643 ntTSL 2 BASIC22■■□□□ 1.11
ATP6V0A4Q9HBG4 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
ATP6V0A4Q9HBG4 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
ATP6V0A4Q9HBG4 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
ATP6V0A4Q9HBG4 RPS2P55-201ENST00000397318 883 ntBASIC22■■□□□ 1.11
ATP6V0A4Q9HBG4 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC22■■□□□ 1.11
ATP6V0A4Q9HBG4 AC107956.1-201ENST00000494359 873 ntBASIC22■■□□□ 1.11
ATP6V0A4Q9HBG4 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC22■■□□□ 1.11
ATP6V0A4Q9HBG4 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC22■■□□□ 1.11
ATP6V0A4Q9HBG4 AC233702.5-201ENST00000584107 538 ntBASIC22■■□□□ 1.11
ATP6V0A4Q9HBG4 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
ATP6V0A4Q9HBG4 AC110285.5-201ENST00000611501 352 ntBASIC22■■□□□ 1.11
ATP6V0A4Q9HBG4 AC073912.3-201ENST00000624414 853 ntBASIC22■■□□□ 1.11
ATP6V0A4Q9HBG4 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC22■■□□□ 1.11
ATP6V0A4Q9HBG4 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
ATP6V0A4Q9HBG4 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC22■■□□□ 1.11
ATP6V0A4Q9HBG4 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
ATP6V0A4Q9HBG4 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
ATP6V0A4Q9HBG4 AL157384.1-201ENST00000445995 2473 ntBASIC21.99■■□□□ 1.11
ATP6V0A4Q9HBG4 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC21.99■■□□□ 1.11
ATP6V0A4Q9HBG4 CD37-204ENST00000535669 1674 ntTSL 2 BASIC21.99■■□□□ 1.11
ATP6V0A4Q9HBG4 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
ATP6V0A4Q9HBG4 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
ATP6V0A4Q9HBG4 TREX2-204ENST00000370212 861 ntTSL 5 BASIC21.99■■□□□ 1.11
ATP6V0A4Q9HBG4 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
ATP6V0A4Q9HBG4 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
ATP6V0A4Q9HBG4 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
ATP6V0A4Q9HBG4 GXYLT1P3-201ENST00000453058 1193 ntBASIC21.99■■□□□ 1.11
ATP6V0A4Q9HBG4 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC21.99■■□□□ 1.11
ATP6V0A4Q9HBG4 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC21.99■■□□□ 1.11
ATP6V0A4Q9HBG4 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
ATP6V0A4Q9HBG4 Six3os1_6.1-201ENST00000620790 196 ntBASIC21.99■■□□□ 1.11
ATP6V0A4Q9HBG4 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC21.99■■□□□ 1.11
ATP6V0A4Q9HBG4 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
ATP6V0A4Q9HBG4 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
ATP6V0A4Q9HBG4 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC21.99■■□□□ 1.11
ATP6V0A4Q9HBG4 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC21.99■■□□□ 1.11
ATP6V0A4Q9HBG4 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC21.99■■□□□ 1.11
ATP6V0A4Q9HBG4 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
ATP6V0A4Q9HBG4 AC116351.2-201ENST00000606540 1585 ntBASIC21.99■■□□□ 1.11
ATP6V0A4Q9HBG4 LINC01006-201ENST00000333319 2292 ntBASIC21.99■■□□□ 1.11
ATP6V0A4Q9HBG4 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
ATP6V0A4Q9HBG4 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC21.99■■□□□ 1.11
ATP6V0A4Q9HBG4 PHGDH-210ENST00000641115 1638 ntBASIC21.98■■□□□ 1.11
ATP6V0A4Q9HBG4 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
ATP6V0A4Q9HBG4 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
ATP6V0A4Q9HBG4 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
ATP6V0A4Q9HBG4 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
ATP6V0A4Q9HBG4 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
ATP6V0A4Q9HBG4 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC21.98■■□□□ 1.11
ATP6V0A4Q9HBG4 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
ATP6V0A4Q9HBG4 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
ATP6V0A4Q9HBG4 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC21.98■■□□□ 1.11
ATP6V0A4Q9HBG4 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC21.98■■□□□ 1.11
ATP6V0A4Q9HBG4 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC21.98■■□□□ 1.11
ATP6V0A4Q9HBG4 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC21.98■■□□□ 1.11
ATP6V0A4Q9HBG4 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC21.98■■□□□ 1.11
ATP6V0A4Q9HBG4 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
ATP6V0A4Q9HBG4 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
ATP6V0A4Q9HBG4 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
ATP6V0A4Q9HBG4 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
ATP6V0A4Q9HBG4 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
ATP6V0A4Q9HBG4 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC21.98■■□□□ 1.11
ATP6V0A4Q9HBG4 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
ATP6V0A4Q9HBG4 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
ATP6V0A4Q9HBG4 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
ATP6V0A4Q9HBG4 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
ATP6V0A4Q9HBG4 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
ATP6V0A4Q9HBG4 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC21.97■■□□□ 1.11
ATP6V0A4Q9HBG4 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
ATP6V0A4Q9HBG4 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC21.97■■□□□ 1.11
ATP6V0A4Q9HBG4 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC21.97■■□□□ 1.11
ATP6V0A4Q9HBG4 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
ATP6V0A4Q9HBG4 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC21.97■■□□□ 1.11
ATP6V0A4Q9HBG4 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
ATP6V0A4Q9HBG4 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC21.97■■□□□ 1.11
ATP6V0A4Q9HBG4 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
ATP6V0A4Q9HBG4 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms