Protein–RNA interactions for Protein: Q9H1C7

CYSTM1, Cysteine-rich and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1Q9H1C7 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC11.59□□□□□ -0.55
CYSTM1Q9H1C7 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.55
CYSTM1Q9H1C7 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC11.58□□□□□ -0.56
CYSTM1Q9H1C7 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CYSTM1Q9H1C7 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
CYSTM1Q9H1C7 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC11.58□□□□□ -0.56
CYSTM1Q9H1C7 AGK-211ENST00000629555 2765 ntTSL 5 BASIC11.58□□□□□ -0.56
CYSTM1Q9H1C7 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CYSTM1Q9H1C7 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC11.58□□□□□ -0.56
CYSTM1Q9H1C7 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
CYSTM1Q9H1C7 BANP-201ENST00000286122 2368 ntTSL 5 BASIC11.58□□□□□ -0.56
CYSTM1Q9H1C7 PCDHB19P-201ENST00000570871 2371 ntBASIC11.58□□□□□ -0.56
CYSTM1Q9H1C7 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CYSTM1Q9H1C7 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC11.58□□□□□ -0.56
CYSTM1Q9H1C7 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC11.58□□□□□ -0.56
CYSTM1Q9H1C7 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
CYSTM1Q9H1C7 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CYSTM1Q9H1C7 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC11.58□□□□□ -0.56
CYSTM1Q9H1C7 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
CYSTM1Q9H1C7 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CYSTM1Q9H1C7 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
CYSTM1Q9H1C7 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CYSTM1Q9H1C7 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC11.58□□□□□ -0.56
CYSTM1Q9H1C7 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
CYSTM1Q9H1C7 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CYSTM1Q9H1C7 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC11.58□□□□□ -0.56
CYSTM1Q9H1C7 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC11.57□□□□□ -0.56
CYSTM1Q9H1C7 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
CYSTM1Q9H1C7 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CYSTM1Q9H1C7 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
CYSTM1Q9H1C7 FP700111.2-201ENST00000619190 1892 ntBASIC11.57□□□□□ -0.56
CYSTM1Q9H1C7 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC11.57□□□□□ -0.56
CYSTM1Q9H1C7 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CYSTM1Q9H1C7 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
CYSTM1Q9H1C7 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
CYSTM1Q9H1C7 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC11.57□□□□□ -0.56
CYSTM1Q9H1C7 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CYSTM1Q9H1C7 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CYSTM1Q9H1C7 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
CYSTM1Q9H1C7 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CYSTM1Q9H1C7 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CYSTM1Q9H1C7 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
CYSTM1Q9H1C7 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
CYSTM1Q9H1C7 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
CYSTM1Q9H1C7 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
CYSTM1Q9H1C7 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CYSTM1Q9H1C7 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC11.57□□□□□ -0.56
CYSTM1Q9H1C7 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC11.57□□□□□ -0.56
CYSTM1Q9H1C7 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CYSTM1Q9H1C7 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
CYSTM1Q9H1C7 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC11.57□□□□□ -0.56
CYSTM1Q9H1C7 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
CYSTM1Q9H1C7 PCDHB17P-201ENST00000539533 2393 ntBASIC11.57□□□□□ -0.56
CYSTM1Q9H1C7 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
CYSTM1Q9H1C7 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
CYSTM1Q9H1C7 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC11.57□□□□□ -0.56
CYSTM1Q9H1C7 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
CYSTM1Q9H1C7 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC11.57□□□□□ -0.56
CYSTM1Q9H1C7 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC11.57□□□□□ -0.56
CYSTM1Q9H1C7 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CYSTM1Q9H1C7 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
CYSTM1Q9H1C7 MYB-201ENST00000316528 3571 ntTSL 5 BASIC11.57□□□□□ -0.56
CYSTM1Q9H1C7 MYB-241ENST00000616088 3573 ntTSL 5 BASIC11.57□□□□□ -0.56
CYSTM1Q9H1C7 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CYSTM1Q9H1C7 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC11.57□□□□□ -0.56
CYSTM1Q9H1C7 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CYSTM1Q9H1C7 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC11.56□□□□□ -0.56
CYSTM1Q9H1C7 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
CYSTM1Q9H1C7 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC11.56□□□□□ -0.56
CYSTM1Q9H1C7 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CYSTM1Q9H1C7 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC11.56□□□□□ -0.56
CYSTM1Q9H1C7 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
CYSTM1Q9H1C7 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CYSTM1Q9H1C7 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CYSTM1Q9H1C7 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC11.56□□□□□ -0.56
CYSTM1Q9H1C7 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
CYSTM1Q9H1C7 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CYSTM1Q9H1C7 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
CYSTM1Q9H1C7 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CYSTM1Q9H1C7 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC11.56□□□□□ -0.56
CYSTM1Q9H1C7 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC11.56□□□□□ -0.56
CYSTM1Q9H1C7 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
CYSTM1Q9H1C7 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
CYSTM1Q9H1C7 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CYSTM1Q9H1C7 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC11.56□□□□□ -0.56
CYSTM1Q9H1C7 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CYSTM1Q9H1C7 USF2-207ENST00000595068 1612 ntTSL 5 BASIC11.56□□□□□ -0.56
CYSTM1Q9H1C7 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
CYSTM1Q9H1C7 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
CYSTM1Q9H1C7 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
CYSTM1Q9H1C7 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
CYSTM1Q9H1C7 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CYSTM1Q9H1C7 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CYSTM1Q9H1C7 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
CYSTM1Q9H1C7 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC11.56□□□□□ -0.56
CYSTM1Q9H1C7 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CYSTM1Q9H1C7 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC11.56□□□□□ -0.56
CYSTM1Q9H1C7 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC11.56□□□□□ -0.56
CYSTM1Q9H1C7 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
CYSTM1Q9H1C7 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms