Protein–RNA interactions for Protein: Q9GZT3

SLIRP, SRA stem-loop-interacting RNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRPQ9GZT3 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
SLIRPQ9GZT3 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SLIRPQ9GZT3 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.43■□□□□ 0.38
SLIRPQ9GZT3 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
SLIRPQ9GZT3 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SLIRPQ9GZT3 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
SLIRPQ9GZT3 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC17.43■□□□□ 0.38
SLIRPQ9GZT3 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
SLIRPQ9GZT3 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC17.43■□□□□ 0.38
SLIRPQ9GZT3 SLC47A1P1-202ENST00000449666 945 ntBASIC17.43■□□□□ 0.38
SLIRPQ9GZT3 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC17.43■□□□□ 0.38
SLIRPQ9GZT3 AC053503.5-201ENST00000601508 636 ntBASIC17.43■□□□□ 0.38
SLIRPQ9GZT3 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC17.43■□□□□ 0.38
SLIRPQ9GZT3 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
SLIRPQ9GZT3 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
SLIRPQ9GZT3 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
SLIRPQ9GZT3 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SLIRPQ9GZT3 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
SLIRPQ9GZT3 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
SLIRPQ9GZT3 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
SLIRPQ9GZT3 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
SLIRPQ9GZT3 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
SLIRPQ9GZT3 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC17.43■□□□□ 0.38
SLIRPQ9GZT3 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
SLIRPQ9GZT3 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
SLIRPQ9GZT3 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SLIRPQ9GZT3 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SLIRPQ9GZT3 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
SLIRPQ9GZT3 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
SLIRPQ9GZT3 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SLIRPQ9GZT3 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.42■□□□□ 0.38
SLIRPQ9GZT3 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SLIRPQ9GZT3 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
SLIRPQ9GZT3 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
SLIRPQ9GZT3 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC17.42■□□□□ 0.38
SLIRPQ9GZT3 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
SLIRPQ9GZT3 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC17.42■□□□□ 0.38
SLIRPQ9GZT3 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
SLIRPQ9GZT3 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC17.42■□□□□ 0.38
SLIRPQ9GZT3 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SLIRPQ9GZT3 KRT125P-201ENST00000546827 989 ntBASIC17.42■□□□□ 0.38
SLIRPQ9GZT3 BRD4-212ENST00000630599 726 ntTSL 2 BASIC17.42■□□□□ 0.38
SLIRPQ9GZT3 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SLIRPQ9GZT3 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.42■□□□□ 0.38
SLIRPQ9GZT3 AC116050.2-201ENST00000612102 1779 ntBASIC17.42■□□□□ 0.38
SLIRPQ9GZT3 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.42■□□□□ 0.38
SLIRPQ9GZT3 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
SLIRPQ9GZT3 AC005224.4-201ENST00000583262 1652 ntBASIC17.42■□□□□ 0.38
SLIRPQ9GZT3 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SLIRPQ9GZT3 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
SLIRPQ9GZT3 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC17.41■□□□□ 0.38
SLIRPQ9GZT3 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SLIRPQ9GZT3 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SLIRPQ9GZT3 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
SLIRPQ9GZT3 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SLIRPQ9GZT3 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SLIRPQ9GZT3 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SLIRPQ9GZT3 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC17.41■□□□□ 0.38
SLIRPQ9GZT3 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SLIRPQ9GZT3 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SLIRPQ9GZT3 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SLIRPQ9GZT3 AC012313.1-201ENST00000593393 3059 ntBASIC17.41■□□□□ 0.38
SLIRPQ9GZT3 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC17.41■□□□□ 0.38
SLIRPQ9GZT3 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC17.41■□□□□ 0.38
SLIRPQ9GZT3 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC17.41■□□□□ 0.38
SLIRPQ9GZT3 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
SLIRPQ9GZT3 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SLIRPQ9GZT3 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.41■□□□□ 0.38
SLIRPQ9GZT3 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SLIRPQ9GZT3 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC17.41■□□□□ 0.38
SLIRPQ9GZT3 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SLIRPQ9GZT3 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC17.41■□□□□ 0.38
SLIRPQ9GZT3 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SLIRPQ9GZT3 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC17.41■□□□□ 0.38
SLIRPQ9GZT3 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SLIRPQ9GZT3 AC093525.10-201ENST00000625130 1569 ntBASIC17.4■□□□□ 0.38
SLIRPQ9GZT3 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC17.4■□□□□ 0.38
SLIRPQ9GZT3 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SLIRPQ9GZT3 AC020763.4-201ENST00000623414 4170 ntBASIC17.4■□□□□ 0.38
SLIRPQ9GZT3 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.4■□□□□ 0.38
SLIRPQ9GZT3 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC17.4■□□□□ 0.38
SLIRPQ9GZT3 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SLIRPQ9GZT3 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SLIRPQ9GZT3 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
SLIRPQ9GZT3 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
SLIRPQ9GZT3 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SLIRPQ9GZT3 PRTG-204ENST00000561292 833 ntTSL 3 BASIC17.4■□□□□ 0.38
SLIRPQ9GZT3 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC17.4■□□□□ 0.38
SLIRPQ9GZT3 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC17.4■□□□□ 0.38
SLIRPQ9GZT3 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
SLIRPQ9GZT3 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC17.4■□□□□ 0.38
SLIRPQ9GZT3 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC17.4■□□□□ 0.38
SLIRPQ9GZT3 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
SLIRPQ9GZT3 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
SLIRPQ9GZT3 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC17.4■□□□□ 0.38
SLIRPQ9GZT3 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SLIRPQ9GZT3 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
SLIRPQ9GZT3 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.39■□□□□ 0.38
SLIRPQ9GZT3 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
SLIRPQ9GZT3 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms