Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC19.78■□□□□ 0.76
CPNE1Q99829 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CPNE1Q99829 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CPNE1Q99829 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CPNE1Q99829 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CPNE1Q99829 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CPNE1Q99829 AC026271.2-201ENST00000428091 497 ntBASIC19.78■□□□□ 0.76
CPNE1Q99829 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CPNE1Q99829 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CPNE1Q99829 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC19.78■□□□□ 0.76
CPNE1Q99829 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC19.78■□□□□ 0.76
CPNE1Q99829 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CPNE1Q99829 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CPNE1Q99829 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
CPNE1Q99829 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
CPNE1Q99829 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CPNE1Q99829 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CPNE1Q99829 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CPNE1Q99829 AP000974.1-201ENST00000623909 2387 ntBASIC19.78■□□□□ 0.76
CPNE1Q99829 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
CPNE1Q99829 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CPNE1Q99829 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC19.78■□□□□ 0.76
CPNE1Q99829 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CPNE1Q99829 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CPNE1Q99829 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CPNE1Q99829 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CPNE1Q99829 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
CPNE1Q99829 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CPNE1Q99829 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC19.77■□□□□ 0.76
CPNE1Q99829 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
CPNE1Q99829 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CPNE1Q99829 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CPNE1Q99829 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CPNE1Q99829 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CPNE1Q99829 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CPNE1Q99829 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CPNE1Q99829 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CPNE1Q99829 TP73-202ENST00000354437 2140 ntTSL 5 BASIC19.77■□□□□ 0.76
CPNE1Q99829 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CPNE1Q99829 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC19.77■□□□□ 0.76
CPNE1Q99829 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC19.77■□□□□ 0.76
CPNE1Q99829 MDK-213ENST00000617138 635 ntTSL 2 BASIC19.77■□□□□ 0.76
CPNE1Q99829 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CPNE1Q99829 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC19.77■□□□□ 0.76
CPNE1Q99829 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC19.77■□□□□ 0.76
CPNE1Q99829 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CPNE1Q99829 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CPNE1Q99829 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
CPNE1Q99829 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CPNE1Q99829 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CPNE1Q99829 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CPNE1Q99829 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
CPNE1Q99829 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CPNE1Q99829 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC19.76■□□□□ 0.75
CPNE1Q99829 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CPNE1Q99829 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.76■□□□□ 0.75
CPNE1Q99829 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
CPNE1Q99829 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CPNE1Q99829 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
CPNE1Q99829 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
CPNE1Q99829 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
CPNE1Q99829 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CPNE1Q99829 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CPNE1Q99829 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CPNE1Q99829 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CPNE1Q99829 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CPNE1Q99829 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CPNE1Q99829 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CPNE1Q99829 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
CPNE1Q99829 HES2-205ENST00000487437 968 ntTSL 3 BASIC19.76■□□□□ 0.75
CPNE1Q99829 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC19.76■□□□□ 0.75
CPNE1Q99829 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC19.76■□□□□ 0.75
CPNE1Q99829 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC19.76■□□□□ 0.75
CPNE1Q99829 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CPNE1Q99829 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC19.76■□□□□ 0.75
CPNE1Q99829 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CPNE1Q99829 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CPNE1Q99829 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
CPNE1Q99829 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.76■□□□□ 0.75
CPNE1Q99829 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
CPNE1Q99829 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CPNE1Q99829 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CPNE1Q99829 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.76■□□□□ 0.75
CPNE1Q99829 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.75■□□□□ 0.75
CPNE1Q99829 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CPNE1Q99829 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.75■□□□□ 0.75
CPNE1Q99829 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CPNE1Q99829 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
CPNE1Q99829 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
CPNE1Q99829 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
CPNE1Q99829 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.75■□□□□ 0.75
CPNE1Q99829 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CPNE1Q99829 AL512625.2-201ENST00000417533 625 ntBASIC19.75■□□□□ 0.75
CPNE1Q99829 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC19.75■□□□□ 0.75
CPNE1Q99829 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CPNE1Q99829 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC19.75■□□□□ 0.75
CPNE1Q99829 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CPNE1Q99829 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
CPNE1Q99829 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CPNE1Q99829 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms