Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC20.37■□□□□ 0.85
IFT43Q96FT9 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC20.37■□□□□ 0.85
IFT43Q96FT9 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
IFT43Q96FT9 AC087289.5-201ENST00000586076 3175 ntBASIC20.36■□□□□ 0.85
IFT43Q96FT9 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
IFT43Q96FT9 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
IFT43Q96FT9 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
IFT43Q96FT9 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
IFT43Q96FT9 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
IFT43Q96FT9 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC20.36■□□□□ 0.85
IFT43Q96FT9 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC20.36■□□□□ 0.85
IFT43Q96FT9 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
IFT43Q96FT9 AC060766.5-201ENST00000590539 871 ntBASIC20.36■□□□□ 0.85
IFT43Q96FT9 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC20.36■□□□□ 0.85
IFT43Q96FT9 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.36■□□□□ 0.85
IFT43Q96FT9 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.36■□□□□ 0.85
IFT43Q96FT9 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
IFT43Q96FT9 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.36■□□□□ 0.85
IFT43Q96FT9 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
IFT43Q96FT9 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
IFT43Q96FT9 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
IFT43Q96FT9 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
IFT43Q96FT9 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.35■□□□□ 0.85
IFT43Q96FT9 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
IFT43Q96FT9 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
IFT43Q96FT9 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
IFT43Q96FT9 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC20.35■□□□□ 0.85
IFT43Q96FT9 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
IFT43Q96FT9 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
IFT43Q96FT9 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC20.35■□□□□ 0.85
IFT43Q96FT9 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
IFT43Q96FT9 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC20.35■□□□□ 0.85
IFT43Q96FT9 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
IFT43Q96FT9 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC20.35■□□□□ 0.85
IFT43Q96FT9 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
IFT43Q96FT9 AL162377.1-201ENST00000618844 1793 ntBASIC20.35■□□□□ 0.85
IFT43Q96FT9 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
IFT43Q96FT9 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
IFT43Q96FT9 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.35■□□□□ 0.85
IFT43Q96FT9 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
IFT43Q96FT9 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
IFT43Q96FT9 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
IFT43Q96FT9 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
IFT43Q96FT9 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
IFT43Q96FT9 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
IFT43Q96FT9 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
IFT43Q96FT9 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
IFT43Q96FT9 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
IFT43Q96FT9 AC093827.2-201ENST00000512654 315 ntBASIC20.34■□□□□ 0.85
IFT43Q96FT9 AP003097.1-201ENST00000530657 1135 ntBASIC20.34■□□□□ 0.85
IFT43Q96FT9 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC20.34■□□□□ 0.85
IFT43Q96FT9 AC006058.3-201ENST00000606217 1069 ntBASIC20.34■□□□□ 0.85
IFT43Q96FT9 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
IFT43Q96FT9 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
IFT43Q96FT9 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
IFT43Q96FT9 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
IFT43Q96FT9 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
IFT43Q96FT9 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
IFT43Q96FT9 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
IFT43Q96FT9 H19-201ENST00000411754 1788 ntTSL 5 BASIC20.34■□□□□ 0.85
IFT43Q96FT9 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.33■□□□□ 0.85
IFT43Q96FT9 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC20.33■□□□□ 0.85
IFT43Q96FT9 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC20.33■□□□□ 0.85
IFT43Q96FT9 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.33■□□□□ 0.85
IFT43Q96FT9 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
IFT43Q96FT9 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
IFT43Q96FT9 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC20.33■□□□□ 0.85
IFT43Q96FT9 GCSHP5-201ENST00000443090 522 ntBASIC20.33■□□□□ 0.85
IFT43Q96FT9 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC20.33■□□□□ 0.85
IFT43Q96FT9 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
IFT43Q96FT9 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
IFT43Q96FT9 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
IFT43Q96FT9 DET1-205ENST00000558413 583 ntTSL 4 BASIC20.33■□□□□ 0.85
IFT43Q96FT9 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
IFT43Q96FT9 AP006294.2-201ENST00000641667 209 ntBASIC20.33■□□□□ 0.85
IFT43Q96FT9 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
IFT43Q96FT9 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
IFT43Q96FT9 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
IFT43Q96FT9 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.33■□□□□ 0.84
IFT43Q96FT9 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20.33■□□□□ 0.84
IFT43Q96FT9 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC20.33■□□□□ 0.84
IFT43Q96FT9 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
IFT43Q96FT9 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC20.32■□□□□ 0.84
IFT43Q96FT9 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
IFT43Q96FT9 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
IFT43Q96FT9 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.32■□□□□ 0.84
IFT43Q96FT9 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
IFT43Q96FT9 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
IFT43Q96FT9 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC20.32■□□□□ 0.84
IFT43Q96FT9 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
IFT43Q96FT9 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC20.32■□□□□ 0.84
IFT43Q96FT9 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
IFT43Q96FT9 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
IFT43Q96FT9 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
IFT43Q96FT9 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
IFT43Q96FT9 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC20.32■□□□□ 0.84
IFT43Q96FT9 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC20.32■□□□□ 0.84
IFT43Q96FT9 AC128676.1-201ENST00000454392 318 ntBASIC20.32■□□□□ 0.84
IFT43Q96FT9 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
IFT43Q96FT9 AC098590.1-201ENST00000468126 897 ntBASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms