Protein–RNA interactions for Protein: Q8WUE5

CT55, Cancer/testis antigen 55, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CT55Q8WUE5 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
CT55Q8WUE5 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CT55Q8WUE5 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CT55Q8WUE5 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CT55Q8WUE5 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CT55Q8WUE5 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CT55Q8WUE5 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CT55Q8WUE5 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
CT55Q8WUE5 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CT55Q8WUE5 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CT55Q8WUE5 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CT55Q8WUE5 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
CT55Q8WUE5 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CT55Q8WUE5 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
CT55Q8WUE5 PHGDH-210ENST00000641115 1638 ntBASIC18.49■□□□□ 0.55
CT55Q8WUE5 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC18.49■□□□□ 0.55
CT55Q8WUE5 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC18.49■□□□□ 0.55
CT55Q8WUE5 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CT55Q8WUE5 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
CT55Q8WUE5 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CT55Q8WUE5 MESTP1-201ENST00000404287 994 ntBASIC18.49■□□□□ 0.55
CT55Q8WUE5 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CT55Q8WUE5 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC18.49■□□□□ 0.55
CT55Q8WUE5 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC18.49■□□□□ 0.55
CT55Q8WUE5 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC18.49■□□□□ 0.55
CT55Q8WUE5 DUT-205ENST00000558813 769 ntTSL 2 BASIC18.49■□□□□ 0.55
CT55Q8WUE5 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CT55Q8WUE5 FSCN1P1-201ENST00000568912 1481 ntBASIC18.49■□□□□ 0.55
CT55Q8WUE5 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
CT55Q8WUE5 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CT55Q8WUE5 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
CT55Q8WUE5 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
CT55Q8WUE5 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC18.49■□□□□ 0.55
CT55Q8WUE5 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CT55Q8WUE5 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CT55Q8WUE5 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC18.48■□□□□ 0.55
CT55Q8WUE5 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
CT55Q8WUE5 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC18.48■□□□□ 0.55
CT55Q8WUE5 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CT55Q8WUE5 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CT55Q8WUE5 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CT55Q8WUE5 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CT55Q8WUE5 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC18.48■□□□□ 0.55
CT55Q8WUE5 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC18.48■□□□□ 0.55
CT55Q8WUE5 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC18.48■□□□□ 0.55
CT55Q8WUE5 AL445228.2-201ENST00000605589 952 ntBASIC18.48■□□□□ 0.55
CT55Q8WUE5 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC18.48■□□□□ 0.55
CT55Q8WUE5 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CT55Q8WUE5 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CT55Q8WUE5 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CT55Q8WUE5 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CT55Q8WUE5 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CT55Q8WUE5 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC18.48■□□□□ 0.55
CT55Q8WUE5 KRT18P22-201ENST00000402024 1347 ntBASIC18.48■□□□□ 0.55
CT55Q8WUE5 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
CT55Q8WUE5 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC18.47■□□□□ 0.55
CT55Q8WUE5 GOLGA6L3-201ENST00000507199 1679 ntBASIC18.47■□□□□ 0.55
CT55Q8WUE5 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CT55Q8WUE5 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC18.47■□□□□ 0.55
CT55Q8WUE5 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CT55Q8WUE5 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
CT55Q8WUE5 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CT55Q8WUE5 AC113347.1-201ENST00000413321 391 ntBASIC18.47■□□□□ 0.55
CT55Q8WUE5 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CT55Q8WUE5 KRT18P57-201ENST00000443599 1254 ntBASIC18.47■□□□□ 0.55
CT55Q8WUE5 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CT55Q8WUE5 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC18.47■□□□□ 0.55
CT55Q8WUE5 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC18.47■□□□□ 0.55
CT55Q8WUE5 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC18.47■□□□□ 0.55
CT55Q8WUE5 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC18.47■□□□□ 0.55
CT55Q8WUE5 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC18.47■□□□□ 0.55
CT55Q8WUE5 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC18.47■□□□□ 0.55
CT55Q8WUE5 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
CT55Q8WUE5 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CT55Q8WUE5 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC18.47■□□□□ 0.55
CT55Q8WUE5 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CT55Q8WUE5 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CT55Q8WUE5 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CT55Q8WUE5 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC18.47■□□□□ 0.55
CT55Q8WUE5 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC18.47■□□□□ 0.55
CT55Q8WUE5 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
CT55Q8WUE5 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CT55Q8WUE5 SMG8-203ENST00000578922 2178 ntBASIC18.47■□□□□ 0.55
CT55Q8WUE5 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CT55Q8WUE5 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18.46■□□□□ 0.55
CT55Q8WUE5 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC18.46■□□□□ 0.55
CT55Q8WUE5 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
CT55Q8WUE5 CRAT-202ENST00000393384 973 ntTSL 2 BASIC18.46■□□□□ 0.55
CT55Q8WUE5 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC18.46■□□□□ 0.55
CT55Q8WUE5 AC004980.1-204ENST00000429707 299 ntBASIC18.46■□□□□ 0.55
CT55Q8WUE5 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC18.46■□□□□ 0.55
CT55Q8WUE5 B3GAT3P1-201ENST00000471720 806 ntBASIC18.46■□□□□ 0.55
CT55Q8WUE5 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC18.46■□□□□ 0.55
CT55Q8WUE5 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC18.46■□□□□ 0.55
CT55Q8WUE5 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CT55Q8WUE5 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC18.46■□□□□ 0.55
CT55Q8WUE5 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC18.46■□□□□ 0.55
CT55Q8WUE5 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CT55Q8WUE5 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CT55Q8WUE5 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms