Protein–RNA interactions for Protein: Q8TBE1

CNIH3, Protein cornichon homolog 3, humanhuman

Predictions only

Length 160 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH3Q8TBE1 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CNIH3Q8TBE1 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CNIH3Q8TBE1 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CNIH3Q8TBE1 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
CNIH3Q8TBE1 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC18.07■□□□□ 0.48
CNIH3Q8TBE1 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.07■□□□□ 0.48
CNIH3Q8TBE1 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
CNIH3Q8TBE1 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
CNIH3Q8TBE1 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CNIH3Q8TBE1 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CNIH3Q8TBE1 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CNIH3Q8TBE1 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CNIH3Q8TBE1 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CNIH3Q8TBE1 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC18.06■□□□□ 0.48
CNIH3Q8TBE1 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.06■□□□□ 0.48
CNIH3Q8TBE1 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC18.06■□□□□ 0.48
CNIH3Q8TBE1 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18.06■□□□□ 0.48
CNIH3Q8TBE1 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CNIH3Q8TBE1 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CNIH3Q8TBE1 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CNIH3Q8TBE1 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CNIH3Q8TBE1 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CNIH3Q8TBE1 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
CNIH3Q8TBE1 AC099791.1-201ENST00000416440 715 ntBASIC18.06■□□□□ 0.48
CNIH3Q8TBE1 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC18.06■□□□□ 0.48
CNIH3Q8TBE1 SERP1-208ENST00000491660 830 ntTSL 2 BASIC18.06■□□□□ 0.48
CNIH3Q8TBE1 AC024257.2-201ENST00000549699 147 ntBASIC18.06■□□□□ 0.48
CNIH3Q8TBE1 AC138907.5-202ENST00000569484 235 ntBASIC18.06■□□□□ 0.48
CNIH3Q8TBE1 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC18.06■□□□□ 0.48
CNIH3Q8TBE1 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CNIH3Q8TBE1 MPST-208ENST00000628507 698 ntTSL 5 BASIC18.06■□□□□ 0.48
CNIH3Q8TBE1 CPT2-209ENST00000636935 803 ntTSL 5 BASIC18.06■□□□□ 0.48
CNIH3Q8TBE1 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CNIH3Q8TBE1 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.06■□□□□ 0.48
CNIH3Q8TBE1 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
CNIH3Q8TBE1 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CNIH3Q8TBE1 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CNIH3Q8TBE1 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
CNIH3Q8TBE1 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CNIH3Q8TBE1 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CNIH3Q8TBE1 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CNIH3Q8TBE1 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CNIH3Q8TBE1 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CNIH3Q8TBE1 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CNIH3Q8TBE1 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CNIH3Q8TBE1 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
CNIH3Q8TBE1 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC18.05■□□□□ 0.48
CNIH3Q8TBE1 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CNIH3Q8TBE1 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CNIH3Q8TBE1 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
CNIH3Q8TBE1 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CNIH3Q8TBE1 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CNIH3Q8TBE1 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CNIH3Q8TBE1 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CNIH3Q8TBE1 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
CNIH3Q8TBE1 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CNIH3Q8TBE1 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CNIH3Q8TBE1 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.05■□□□□ 0.48
CNIH3Q8TBE1 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.05■□□□□ 0.48
CNIH3Q8TBE1 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CNIH3Q8TBE1 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
CNIH3Q8TBE1 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CNIH3Q8TBE1 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CNIH3Q8TBE1 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
CNIH3Q8TBE1 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CNIH3Q8TBE1 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
CNIH3Q8TBE1 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC18.05■□□□□ 0.48
CNIH3Q8TBE1 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
CNIH3Q8TBE1 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CNIH3Q8TBE1 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC18.05■□□□□ 0.48
CNIH3Q8TBE1 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CNIH3Q8TBE1 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CNIH3Q8TBE1 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CNIH3Q8TBE1 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.05■□□□□ 0.48
CNIH3Q8TBE1 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CNIH3Q8TBE1 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CNIH3Q8TBE1 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.05■□□□□ 0.48
CNIH3Q8TBE1 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
CNIH3Q8TBE1 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CNIH3Q8TBE1 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CNIH3Q8TBE1 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CNIH3Q8TBE1 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC18.04■□□□□ 0.48
CNIH3Q8TBE1 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CNIH3Q8TBE1 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CNIH3Q8TBE1 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CNIH3Q8TBE1 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CNIH3Q8TBE1 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CNIH3Q8TBE1 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
CNIH3Q8TBE1 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CNIH3Q8TBE1 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CNIH3Q8TBE1 KRT87P-202ENST00000534226 1464 ntBASIC18.04■□□□□ 0.48
CNIH3Q8TBE1 MIR572-201ENST00000384983 95 ntBASIC18.04■□□□□ 0.48
CNIH3Q8TBE1 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC18.04■□□□□ 0.48
CNIH3Q8TBE1 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC18.04■□□□□ 0.48
CNIH3Q8TBE1 TPRG1LP1-201ENST00000598702 760 ntBASIC18.04■□□□□ 0.48
CNIH3Q8TBE1 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
CNIH3Q8TBE1 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CNIH3Q8TBE1 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
CNIH3Q8TBE1 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CNIH3Q8TBE1 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms