Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SCN4BQ8IWT1 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SCN4BQ8IWT1 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SCN4BQ8IWT1 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SCN4BQ8IWT1 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
SCN4BQ8IWT1 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
SCN4BQ8IWT1 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
SCN4BQ8IWT1 AC018553.1-201ENST00000616682 1458 ntBASIC20.89■□□□□ 0.94
SCN4BQ8IWT1 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SCN4BQ8IWT1 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SCN4BQ8IWT1 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SCN4BQ8IWT1 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SCN4BQ8IWT1 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
SCN4BQ8IWT1 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC20.89■□□□□ 0.93
SCN4BQ8IWT1 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC20.89■□□□□ 0.93
SCN4BQ8IWT1 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
SCN4BQ8IWT1 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SCN4BQ8IWT1 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.89■□□□□ 0.93
SCN4BQ8IWT1 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC20.89■□□□□ 0.93
SCN4BQ8IWT1 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
SCN4BQ8IWT1 AC116351.2-201ENST00000606540 1585 ntBASIC20.89■□□□□ 0.93
SCN4BQ8IWT1 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SCN4BQ8IWT1 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SCN4BQ8IWT1 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SCN4BQ8IWT1 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.88■□□□□ 0.93
SCN4BQ8IWT1 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SCN4BQ8IWT1 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
SCN4BQ8IWT1 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
SCN4BQ8IWT1 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC20.88■□□□□ 0.93
SCN4BQ8IWT1 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
SCN4BQ8IWT1 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
SCN4BQ8IWT1 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SCN4BQ8IWT1 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SCN4BQ8IWT1 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SCN4BQ8IWT1 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SCN4BQ8IWT1 TSPY7P-201ENST00000431358 1114 ntBASIC20.88■□□□□ 0.93
SCN4BQ8IWT1 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC20.88■□□□□ 0.93
SCN4BQ8IWT1 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SCN4BQ8IWT1 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC20.88■□□□□ 0.93
SCN4BQ8IWT1 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC20.88■□□□□ 0.93
SCN4BQ8IWT1 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
SCN4BQ8IWT1 AP001412.1-201ENST00000608405 714 ntBASIC20.88■□□□□ 0.93
SCN4BQ8IWT1 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC20.88■□□□□ 0.93
SCN4BQ8IWT1 AL049637.2-201ENST00000641778 930 ntBASIC20.88■□□□□ 0.93
SCN4BQ8IWT1 PHGDH-210ENST00000641115 1638 ntBASIC20.88■□□□□ 0.93
SCN4BQ8IWT1 FEM1AP1-201ENST00000431297 1995 ntBASIC20.88■□□□□ 0.93
SCN4BQ8IWT1 AP005212.1-201ENST00000581547 1997 ntBASIC20.88■□□□□ 0.93
SCN4BQ8IWT1 BX119927.1-201ENST00000636596 1552 ntBASIC20.88■□□□□ 0.93
SCN4BQ8IWT1 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SCN4BQ8IWT1 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC20.88■□□□□ 0.93
SCN4BQ8IWT1 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC20.88■□□□□ 0.93
SCN4BQ8IWT1 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SCN4BQ8IWT1 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SCN4BQ8IWT1 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SCN4BQ8IWT1 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC20.87■□□□□ 0.93
SCN4BQ8IWT1 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SCN4BQ8IWT1 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.87■□□□□ 0.93
SCN4BQ8IWT1 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SCN4BQ8IWT1 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SCN4BQ8IWT1 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SCN4BQ8IWT1 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SCN4BQ8IWT1 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC20.87■□□□□ 0.93
SCN4BQ8IWT1 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SCN4BQ8IWT1 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SCN4BQ8IWT1 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SCN4BQ8IWT1 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.87■□□□□ 0.93
SCN4BQ8IWT1 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SCN4BQ8IWT1 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
SCN4BQ8IWT1 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SCN4BQ8IWT1 AP006587.1-201ENST00000534129 1502 ntBASIC20.87■□□□□ 0.93
SCN4BQ8IWT1 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SCN4BQ8IWT1 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SCN4BQ8IWT1 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SCN4BQ8IWT1 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
SCN4BQ8IWT1 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
SCN4BQ8IWT1 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SCN4BQ8IWT1 AC092667.1-201ENST00000434301 2586 ntBASIC20.86■□□□□ 0.93
SCN4BQ8IWT1 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC20.86■□□□□ 0.93
SCN4BQ8IWT1 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SCN4BQ8IWT1 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SCN4BQ8IWT1 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
SCN4BQ8IWT1 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
SCN4BQ8IWT1 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC20.86■□□□□ 0.93
SCN4BQ8IWT1 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SCN4BQ8IWT1 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
SCN4BQ8IWT1 AL512408.1-201ENST00000569378 2000 ntBASIC20.86■□□□□ 0.93
SCN4BQ8IWT1 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SCN4BQ8IWT1 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.86■□□□□ 0.93
SCN4BQ8IWT1 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SCN4BQ8IWT1 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC20.86■□□□□ 0.93
SCN4BQ8IWT1 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SCN4BQ8IWT1 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
SCN4BQ8IWT1 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SCN4BQ8IWT1 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC20.85■□□□□ 0.93
SCN4BQ8IWT1 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SCN4BQ8IWT1 TFP1-202ENST00000475455 1573 ntBASIC20.85■□□□□ 0.93
SCN4BQ8IWT1 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
SCN4BQ8IWT1 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC20.85■□□□□ 0.93
SCN4BQ8IWT1 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SCN4BQ8IWT1 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms