Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
LRRC28Q86X40 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
LRRC28Q86X40 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
LRRC28Q86X40 NEFHP1-201ENST00000412845 2629 ntBASIC17.58■□□□□ 0.41
LRRC28Q86X40 AC061975.6-201ENST00000579045 1553 ntBASIC17.58■□□□□ 0.41
LRRC28Q86X40 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
LRRC28Q86X40 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
LRRC28Q86X40 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
LRRC28Q86X40 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC17.58■□□□□ 0.41
LRRC28Q86X40 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.41
LRRC28Q86X40 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
LRRC28Q86X40 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LRRC28Q86X40 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC17.58■□□□□ 0.4
LRRC28Q86X40 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
LRRC28Q86X40 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC17.58■□□□□ 0.4
LRRC28Q86X40 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC17.58■□□□□ 0.4
LRRC28Q86X40 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC17.58■□□□□ 0.4
LRRC28Q86X40 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC17.58■□□□□ 0.4
LRRC28Q86X40 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC17.58■□□□□ 0.4
LRRC28Q86X40 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC17.58■□□□□ 0.4
LRRC28Q86X40 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
LRRC28Q86X40 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
LRRC28Q86X40 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17.58■□□□□ 0.4
LRRC28Q86X40 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
LRRC28Q86X40 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LRRC28Q86X40 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LRRC28Q86X40 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
LRRC28Q86X40 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC17.57■□□□□ 0.4
LRRC28Q86X40 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LRRC28Q86X40 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
LRRC28Q86X40 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
LRRC28Q86X40 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC17.57■□□□□ 0.4
LRRC28Q86X40 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
LRRC28Q86X40 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LRRC28Q86X40 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
LRRC28Q86X40 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
LRRC28Q86X40 AC007322.1-201ENST00000426983 750 ntBASIC17.57■□□□□ 0.4
LRRC28Q86X40 TERF1P5-201ENST00000477545 1207 ntBASIC17.57■□□□□ 0.4
LRRC28Q86X40 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC17.57■□□□□ 0.4
LRRC28Q86X40 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC17.57■□□□□ 0.4
LRRC28Q86X40 PARP1-210ENST00000629232 477 ntTSL 5 BASIC17.57■□□□□ 0.4
LRRC28Q86X40 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC17.57■□□□□ 0.4
LRRC28Q86X40 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LRRC28Q86X40 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LRRC28Q86X40 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC17.56■□□□□ 0.4
LRRC28Q86X40 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC17.56■□□□□ 0.4
LRRC28Q86X40 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
LRRC28Q86X40 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC17.56■□□□□ 0.4
LRRC28Q86X40 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
LRRC28Q86X40 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LRRC28Q86X40 TREX1-205ENST00000625293 1783 ntBASIC17.56■□□□□ 0.4
LRRC28Q86X40 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC17.56■□□□□ 0.4
LRRC28Q86X40 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LRRC28Q86X40 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
LRRC28Q86X40 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRRC28Q86X40 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
LRRC28Q86X40 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LRRC28Q86X40 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC17.56■□□□□ 0.4
LRRC28Q86X40 TK2-208ENST00000545043 1120 ntTSL 2 BASIC17.56■□□□□ 0.4
LRRC28Q86X40 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC17.56■□□□□ 0.4
LRRC28Q86X40 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LRRC28Q86X40 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LRRC28Q86X40 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LRRC28Q86X40 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRRC28Q86X40 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRRC28Q86X40 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRRC28Q86X40 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
LRRC28Q86X40 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRRC28Q86X40 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC17.55■□□□□ 0.4
LRRC28Q86X40 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRRC28Q86X40 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC17.55■□□□□ 0.4
LRRC28Q86X40 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRRC28Q86X40 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRRC28Q86X40 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRRC28Q86X40 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRRC28Q86X40 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRRC28Q86X40 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRRC28Q86X40 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRRC28Q86X40 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRRC28Q86X40 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRRC28Q86X40 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRRC28Q86X40 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
LRRC28Q86X40 CROCCP5-201ENST00000436658 830 ntBASIC17.55■□□□□ 0.4
LRRC28Q86X40 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LRRC28Q86X40 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC17.55■□□□□ 0.4
LRRC28Q86X40 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRRC28Q86X40 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRRC28Q86X40 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC17.55■□□□□ 0.4
LRRC28Q86X40 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
LRRC28Q86X40 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
LRRC28Q86X40 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC17.55■□□□□ 0.4
LRRC28Q86X40 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
LRRC28Q86X40 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRRC28Q86X40 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC17.54■□□□□ 0.4
LRRC28Q86X40 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LRRC28Q86X40 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.54■□□□□ 0.4
LRRC28Q86X40 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LRRC28Q86X40 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRRC28Q86X40 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRRC28Q86X40 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms