Protein–RNA interactions for Protein: Q86VV8

RTTN, Rotatin, humanhuman

Predictions only

Length 2,226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTTNQ86VV8 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
RTTNQ86VV8 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RTTNQ86VV8 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RTTNQ86VV8 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.45■□□□□ 0.38
RTTNQ86VV8 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
RTTNQ86VV8 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RTTNQ86VV8 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RTTNQ86VV8 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC17.45■□□□□ 0.38
RTTNQ86VV8 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC17.45■□□□□ 0.38
RTTNQ86VV8 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RTTNQ86VV8 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC17.45■□□□□ 0.38
RTTNQ86VV8 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
RTTNQ86VV8 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RTTNQ86VV8 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
RTTNQ86VV8 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RTTNQ86VV8 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RTTNQ86VV8 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
RTTNQ86VV8 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RTTNQ86VV8 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RTTNQ86VV8 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RTTNQ86VV8 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RTTNQ86VV8 DPP3P2-201ENST00000416030 1696 ntBASIC17.44■□□□□ 0.38
RTTNQ86VV8 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC17.44■□□□□ 0.38
RTTNQ86VV8 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RTTNQ86VV8 SERPINH1P1-201ENST00000419794 1249 ntBASIC17.44■□□□□ 0.38
RTTNQ86VV8 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
RTTNQ86VV8 HES2-206ENST00000489730 730 ntTSL 2 BASIC17.44■□□□□ 0.38
RTTNQ86VV8 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RTTNQ86VV8 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
RTTNQ86VV8 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RTTNQ86VV8 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC17.44■□□□□ 0.38
RTTNQ86VV8 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
RTTNQ86VV8 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RTTNQ86VV8 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RTTNQ86VV8 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC17.44■□□□□ 0.38
RTTNQ86VV8 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RTTNQ86VV8 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
RTTNQ86VV8 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RTTNQ86VV8 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
RTTNQ86VV8 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RTTNQ86VV8 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC17.44■□□□□ 0.38
RTTNQ86VV8 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RTTNQ86VV8 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC17.44■□□□□ 0.38
RTTNQ86VV8 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC17.44■□□□□ 0.38
RTTNQ86VV8 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC17.44■□□□□ 0.38
RTTNQ86VV8 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
RTTNQ86VV8 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RTTNQ86VV8 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
RTTNQ86VV8 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RTTNQ86VV8 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
RTTNQ86VV8 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
RTTNQ86VV8 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
RTTNQ86VV8 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC17.43■□□□□ 0.38
RTTNQ86VV8 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC17.43■□□□□ 0.38
RTTNQ86VV8 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC17.43■□□□□ 0.38
RTTNQ86VV8 C2orf69P4-201ENST00000565394 541 ntBASIC17.43■□□□□ 0.38
RTTNQ86VV8 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
RTTNQ86VV8 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RTTNQ86VV8 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RTTNQ86VV8 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RTTNQ86VV8 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC17.43■□□□□ 0.38
RTTNQ86VV8 AL158211.5-201ENST00000623583 2518 ntBASIC17.43■□□□□ 0.38
RTTNQ86VV8 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC17.43■□□□□ 0.38
RTTNQ86VV8 MOK-225ENST00000522867 1883 ntTSL 5 BASIC17.43■□□□□ 0.38
RTTNQ86VV8 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RTTNQ86VV8 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RTTNQ86VV8 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
RTTNQ86VV8 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RTTNQ86VV8 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
RTTNQ86VV8 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RTTNQ86VV8 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
RTTNQ86VV8 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
RTTNQ86VV8 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
RTTNQ86VV8 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
RTTNQ86VV8 HES2-205ENST00000487437 968 ntTSL 3 BASIC17.43■□□□□ 0.38
RTTNQ86VV8 REXO1L12P-201ENST00000622156 912 ntBASIC17.43■□□□□ 0.38
RTTNQ86VV8 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RTTNQ86VV8 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RTTNQ86VV8 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC17.43■□□□□ 0.38
RTTNQ86VV8 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC17.43■□□□□ 0.38
RTTNQ86VV8 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RTTNQ86VV8 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC17.42■□□□□ 0.38
RTTNQ86VV8 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RTTNQ86VV8 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RTTNQ86VV8 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RTTNQ86VV8 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
RTTNQ86VV8 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
RTTNQ86VV8 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RTTNQ86VV8 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RTTNQ86VV8 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC17.42■□□□□ 0.38
RTTNQ86VV8 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
RTTNQ86VV8 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC17.42■□□□□ 0.38
RTTNQ86VV8 NXN-202ENST00000537628 1340 ntTSL 3 BASIC17.42■□□□□ 0.38
RTTNQ86VV8 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RTTNQ86VV8 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC17.42■□□□□ 0.38
RTTNQ86VV8 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC17.42■□□□□ 0.38
RTTNQ86VV8 AC124283.5-201ENST00000624661 1809 ntBASIC17.41■□□□□ 0.38
RTTNQ86VV8 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
RTTNQ86VV8 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
RTTNQ86VV8 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms