Protein–RNA interactions for Protein: Q86UQ8

NFE4, Transcription factor NF-E4, humanhuman

Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFE4Q86UQ8 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NFE4Q86UQ8 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NFE4Q86UQ8 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NFE4Q86UQ8 MIR663A-201ENST00000385250 93 ntBASIC14.13□□□□□ -0.15
NFE4Q86UQ8 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
NFE4Q86UQ8 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC14.13□□□□□ -0.15
NFE4Q86UQ8 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC14.13□□□□□ -0.15
NFE4Q86UQ8 AC005181.1-201ENST00000604782 1256 ntBASIC14.13□□□□□ -0.15
NFE4Q86UQ8 GXYLT1P5-201ENST00000614548 1189 ntBASIC14.13□□□□□ -0.15
NFE4Q86UQ8 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NFE4Q86UQ8 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NFE4Q86UQ8 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NFE4Q86UQ8 STX6-204ENST00000542060 4809 ntTSL 2 BASIC14.13□□□□□ -0.15
NFE4Q86UQ8 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC14.13□□□□□ -0.15
NFE4Q86UQ8 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
NFE4Q86UQ8 EXOC3-AS1-202ENST00000623673 1663 ntBASIC14.13□□□□□ -0.15
NFE4Q86UQ8 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NFE4Q86UQ8 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NFE4Q86UQ8 LBX2-AS1-202ENST00000603175 2083 ntBASIC14.13□□□□□ -0.15
NFE4Q86UQ8 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NFE4Q86UQ8 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NFE4Q86UQ8 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
NFE4Q86UQ8 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NFE4Q86UQ8 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
NFE4Q86UQ8 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NFE4Q86UQ8 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NFE4Q86UQ8 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NFE4Q86UQ8 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
NFE4Q86UQ8 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC14.12□□□□□ -0.15
NFE4Q86UQ8 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC14.12□□□□□ -0.15
NFE4Q86UQ8 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NFE4Q86UQ8 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC14.12□□□□□ -0.15
NFE4Q86UQ8 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NFE4Q86UQ8 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC14.12□□□□□ -0.15
NFE4Q86UQ8 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC14.12□□□□□ -0.15
NFE4Q86UQ8 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NFE4Q86UQ8 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NFE4Q86UQ8 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
NFE4Q86UQ8 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC14.12□□□□□ -0.15
NFE4Q86UQ8 GPX1P1-201ENST00000388829 606 ntBASIC14.12□□□□□ -0.15
NFE4Q86UQ8 HLA-L-209ENST00000420110 1011 ntBASIC14.12□□□□□ -0.15
NFE4Q86UQ8 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC14.12□□□□□ -0.15
NFE4Q86UQ8 TERF1P5-201ENST00000477545 1207 ntBASIC14.12□□□□□ -0.15
NFE4Q86UQ8 DUX4L16-201ENST00000555130 1264 ntBASIC14.12□□□□□ -0.15
NFE4Q86UQ8 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC14.12□□□□□ -0.15
NFE4Q86UQ8 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC14.12□□□□□ -0.15
NFE4Q86UQ8 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC14.12□□□□□ -0.15
NFE4Q86UQ8 AL121832.2-201ENST00000610979 668 ntBASIC14.12□□□□□ -0.15
NFE4Q86UQ8 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
NFE4Q86UQ8 AC008694.1-202ENST00000636953 945 ntBASIC14.12□□□□□ -0.15
NFE4Q86UQ8 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
NFE4Q86UQ8 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
NFE4Q86UQ8 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NFE4Q86UQ8 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NFE4Q86UQ8 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
NFE4Q86UQ8 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
NFE4Q86UQ8 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
NFE4Q86UQ8 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NFE4Q86UQ8 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
NFE4Q86UQ8 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NFE4Q86UQ8 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC14.12□□□□□ -0.15
NFE4Q86UQ8 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NFE4Q86UQ8 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NFE4Q86UQ8 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NFE4Q86UQ8 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC14.12□□□□□ -0.15
NFE4Q86UQ8 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC14.11□□□□□ -0.15
NFE4Q86UQ8 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
NFE4Q86UQ8 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
NFE4Q86UQ8 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
NFE4Q86UQ8 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC14.11□□□□□ -0.15
NFE4Q86UQ8 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NFE4Q86UQ8 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC14.11□□□□□ -0.15
NFE4Q86UQ8 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NFE4Q86UQ8 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NFE4Q86UQ8 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
NFE4Q86UQ8 BMP1-204ENST00000397814 836 ntTSL 4 BASIC14.11□□□□□ -0.15
NFE4Q86UQ8 SLC29A4P1-201ENST00000398760 971 ntBASIC14.11□□□□□ -0.15
NFE4Q86UQ8 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NFE4Q86UQ8 NCF1B-203ENST00000435988 1254 ntBASIC14.11□□□□□ -0.15
NFE4Q86UQ8 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC14.11□□□□□ -0.15
NFE4Q86UQ8 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC14.11□□□□□ -0.15
NFE4Q86UQ8 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NFE4Q86UQ8 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC14.11□□□□□ -0.15
NFE4Q86UQ8 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC14.11□□□□□ -0.15
NFE4Q86UQ8 AL109923.1-201ENST00000618799 583 ntBASIC14.11□□□□□ -0.15
NFE4Q86UQ8 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
NFE4Q86UQ8 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NFE4Q86UQ8 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
NFE4Q86UQ8 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC14.11□□□□□ -0.15
NFE4Q86UQ8 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NFE4Q86UQ8 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
NFE4Q86UQ8 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
NFE4Q86UQ8 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC14.11□□□□□ -0.15
NFE4Q86UQ8 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NFE4Q86UQ8 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
NFE4Q86UQ8 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC14.11□□□□□ -0.15
NFE4Q86UQ8 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
NFE4Q86UQ8 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC14.1□□□□□ -0.15
NFE4Q86UQ8 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NFE4Q86UQ8 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms