Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LYSMD3Q7Z3D4 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.9■□□□□ 0.78
LYSMD3Q7Z3D4 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LYSMD3Q7Z3D4 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LYSMD3Q7Z3D4 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LYSMD3Q7Z3D4 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC19.9■□□□□ 0.78
LYSMD3Q7Z3D4 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC19.9■□□□□ 0.78
LYSMD3Q7Z3D4 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC19.9■□□□□ 0.78
LYSMD3Q7Z3D4 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC19.9■□□□□ 0.78
LYSMD3Q7Z3D4 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC19.9■□□□□ 0.78
LYSMD3Q7Z3D4 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC19.9■□□□□ 0.78
LYSMD3Q7Z3D4 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC19.9■□□□□ 0.78
LYSMD3Q7Z3D4 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC19.9■□□□□ 0.78
LYSMD3Q7Z3D4 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC19.9■□□□□ 0.78
LYSMD3Q7Z3D4 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
LYSMD3Q7Z3D4 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
LYSMD3Q7Z3D4 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.9■□□□□ 0.78
LYSMD3Q7Z3D4 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.9■□□□□ 0.78
LYSMD3Q7Z3D4 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LYSMD3Q7Z3D4 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.78
LYSMD3Q7Z3D4 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LYSMD3Q7Z3D4 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
LYSMD3Q7Z3D4 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
LYSMD3Q7Z3D4 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LYSMD3Q7Z3D4 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LYSMD3Q7Z3D4 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
LYSMD3Q7Z3D4 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LYSMD3Q7Z3D4 POM121L13P-201ENST00000422362 380 ntBASIC19.89■□□□□ 0.77
LYSMD3Q7Z3D4 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.89■□□□□ 0.77
LYSMD3Q7Z3D4 ADM-205ENST00000528544 586 ntTSL 2 BASIC19.89■□□□□ 0.77
LYSMD3Q7Z3D4 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC19.89■□□□□ 0.77
LYSMD3Q7Z3D4 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC19.89■□□□□ 0.77
LYSMD3Q7Z3D4 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LYSMD3Q7Z3D4 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
LYSMD3Q7Z3D4 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LYSMD3Q7Z3D4 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
LYSMD3Q7Z3D4 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
LYSMD3Q7Z3D4 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
LYSMD3Q7Z3D4 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.88■□□□□ 0.77
LYSMD3Q7Z3D4 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
LYSMD3Q7Z3D4 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
LYSMD3Q7Z3D4 PHGDH-210ENST00000641115 1638 ntBASIC19.88■□□□□ 0.77
LYSMD3Q7Z3D4 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC19.88■□□□□ 0.77
LYSMD3Q7Z3D4 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC19.88■□□□□ 0.77
LYSMD3Q7Z3D4 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LYSMD3Q7Z3D4 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
LYSMD3Q7Z3D4 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LYSMD3Q7Z3D4 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC19.88■□□□□ 0.77
LYSMD3Q7Z3D4 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.88■□□□□ 0.77
LYSMD3Q7Z3D4 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
LYSMD3Q7Z3D4 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.87■□□□□ 0.77
LYSMD3Q7Z3D4 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LYSMD3Q7Z3D4 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.87■□□□□ 0.77
LYSMD3Q7Z3D4 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.87■□□□□ 0.77
LYSMD3Q7Z3D4 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
LYSMD3Q7Z3D4 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC19.87■□□□□ 0.77
LYSMD3Q7Z3D4 AC233263.1-201ENST00000578059 224 ntBASIC19.87■□□□□ 0.77
LYSMD3Q7Z3D4 ITM2C-210ENST00000620962 501 ntBASIC19.87■□□□□ 0.77
LYSMD3Q7Z3D4 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.87■□□□□ 0.77
LYSMD3Q7Z3D4 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
LYSMD3Q7Z3D4 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
LYSMD3Q7Z3D4 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LYSMD3Q7Z3D4 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LYSMD3Q7Z3D4 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC19.87■□□□□ 0.77
LYSMD3Q7Z3D4 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
LYSMD3Q7Z3D4 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.86■□□□□ 0.77
LYSMD3Q7Z3D4 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LYSMD3Q7Z3D4 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC19.86■□□□□ 0.77
LYSMD3Q7Z3D4 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC19.86■□□□□ 0.77
LYSMD3Q7Z3D4 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LYSMD3Q7Z3D4 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LYSMD3Q7Z3D4 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
LYSMD3Q7Z3D4 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
LYSMD3Q7Z3D4 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
LYSMD3Q7Z3D4 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LYSMD3Q7Z3D4 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
LYSMD3Q7Z3D4 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
LYSMD3Q7Z3D4 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC19.86■□□□□ 0.77
LYSMD3Q7Z3D4 CALM3-202ENST00000391918 702 ntTSL 2 BASIC19.86■□□□□ 0.77
LYSMD3Q7Z3D4 KRT18P29-201ENST00000397031 1267 ntBASIC19.86■□□□□ 0.77
LYSMD3Q7Z3D4 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
LYSMD3Q7Z3D4 THEM4-205ENST00000489410 643 ntTSL 2 BASIC19.86■□□□□ 0.77
LYSMD3Q7Z3D4 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
LYSMD3Q7Z3D4 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC19.86■□□□□ 0.77
LYSMD3Q7Z3D4 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC19.86■□□□□ 0.77
LYSMD3Q7Z3D4 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC19.86■□□□□ 0.77
LYSMD3Q7Z3D4 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
LYSMD3Q7Z3D4 AC006058.3-201ENST00000606217 1069 ntBASIC19.86■□□□□ 0.77
LYSMD3Q7Z3D4 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LYSMD3Q7Z3D4 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LYSMD3Q7Z3D4 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
LYSMD3Q7Z3D4 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
LYSMD3Q7Z3D4 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
LYSMD3Q7Z3D4 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
LYSMD3Q7Z3D4 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
LYSMD3Q7Z3D4 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC19.85■□□□□ 0.77
LYSMD3Q7Z3D4 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
LYSMD3Q7Z3D4 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.85■□□□□ 0.77
LYSMD3Q7Z3D4 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
LYSMD3Q7Z3D4 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms