Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 MIPEPP3-201ENST00000412105 444 ntBASIC18.01■□□□□ 0.47
NIPAL3Q6P499 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC18.01■□□□□ 0.47
NIPAL3Q6P499 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
NIPAL3Q6P499 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC18.01■□□□□ 0.47
NIPAL3Q6P499 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC18.01■□□□□ 0.47
NIPAL3Q6P499 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NIPAL3Q6P499 AL020996.1-203ENST00000536896 2307 ntBASIC18.01■□□□□ 0.47
NIPAL3Q6P499 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NIPAL3Q6P499 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NIPAL3Q6P499 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NIPAL3Q6P499 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NIPAL3Q6P499 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.01■□□□□ 0.47
NIPAL3Q6P499 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
NIPAL3Q6P499 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
NIPAL3Q6P499 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NIPAL3Q6P499 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC18.01■□□□□ 0.47
NIPAL3Q6P499 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
NIPAL3Q6P499 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC18■□□□□ 0.47
NIPAL3Q6P499 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC18■□□□□ 0.47
NIPAL3Q6P499 AC098818.2-201ENST00000564925 2320 ntBASIC18■□□□□ 0.47
NIPAL3Q6P499 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18■□□□□ 0.47
NIPAL3Q6P499 TREX1-205ENST00000625293 1783 ntBASIC18■□□□□ 0.47
NIPAL3Q6P499 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
NIPAL3Q6P499 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC18■□□□□ 0.47
NIPAL3Q6P499 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NIPAL3Q6P499 SERPINH1P1-201ENST00000419794 1249 ntBASIC18■□□□□ 0.47
NIPAL3Q6P499 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC18■□□□□ 0.47
NIPAL3Q6P499 GUSBP6-202ENST00000438529 1198 ntBASIC18■□□□□ 0.47
NIPAL3Q6P499 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC18■□□□□ 0.47
NIPAL3Q6P499 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC18■□□□□ 0.47
NIPAL3Q6P499 PFKL-212ENST00000628044 129 ntTSL 3 BASIC18■□□□□ 0.47
NIPAL3Q6P499 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NIPAL3Q6P499 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC18■□□□□ 0.47
NIPAL3Q6P499 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC18■□□□□ 0.47
NIPAL3Q6P499 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
NIPAL3Q6P499 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
NIPAL3Q6P499 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18■□□□□ 0.47
NIPAL3Q6P499 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
NIPAL3Q6P499 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC18■□□□□ 0.47
NIPAL3Q6P499 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NIPAL3Q6P499 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC18■□□□□ 0.47
NIPAL3Q6P499 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
NIPAL3Q6P499 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC18■□□□□ 0.47
NIPAL3Q6P499 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
NIPAL3Q6P499 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NIPAL3Q6P499 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NIPAL3Q6P499 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NIPAL3Q6P499 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
NIPAL3Q6P499 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NIPAL3Q6P499 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NIPAL3Q6P499 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
NIPAL3Q6P499 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NIPAL3Q6P499 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NIPAL3Q6P499 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC17.99■□□□□ 0.47
NIPAL3Q6P499 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC17.99■□□□□ 0.47
NIPAL3Q6P499 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC17.99■□□□□ 0.47
NIPAL3Q6P499 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NIPAL3Q6P499 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
NIPAL3Q6P499 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NIPAL3Q6P499 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
NIPAL3Q6P499 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NIPAL3Q6P499 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
NIPAL3Q6P499 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
NIPAL3Q6P499 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
NIPAL3Q6P499 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
NIPAL3Q6P499 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
NIPAL3Q6P499 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC17.99■□□□□ 0.47
NIPAL3Q6P499 HES2-205ENST00000487437 968 ntTSL 3 BASIC17.99■□□□□ 0.47
NIPAL3Q6P499 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NIPAL3Q6P499 AC104771.1-201ENST00000603335 964 ntBASIC17.99■□□□□ 0.47
NIPAL3Q6P499 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC17.99■□□□□ 0.47
NIPAL3Q6P499 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC17.99■□□□□ 0.47
NIPAL3Q6P499 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
NIPAL3Q6P499 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
NIPAL3Q6P499 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
NIPAL3Q6P499 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
NIPAL3Q6P499 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
NIPAL3Q6P499 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC17.98■□□□□ 0.47
NIPAL3Q6P499 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC17.98■□□□□ 0.47
NIPAL3Q6P499 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NIPAL3Q6P499 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NIPAL3Q6P499 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC17.98■□□□□ 0.47
NIPAL3Q6P499 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC17.98■□□□□ 0.47
NIPAL3Q6P499 AC005332.7-201ENST00000614046 2005 ntBASIC17.98■□□□□ 0.47
NIPAL3Q6P499 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
NIPAL3Q6P499 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NIPAL3Q6P499 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
NIPAL3Q6P499 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC17.98■□□□□ 0.47
NIPAL3Q6P499 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC17.98■□□□□ 0.47
NIPAL3Q6P499 HLA-L-209ENST00000420110 1011 ntBASIC17.98■□□□□ 0.47
NIPAL3Q6P499 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC17.98■□□□□ 0.47
NIPAL3Q6P499 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC17.98■□□□□ 0.47
NIPAL3Q6P499 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC17.98■□□□□ 0.47
NIPAL3Q6P499 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
NIPAL3Q6P499 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC17.98■□□□□ 0.47
NIPAL3Q6P499 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NIPAL3Q6P499 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NIPAL3Q6P499 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
NIPAL3Q6P499 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NIPAL3Q6P499 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms