Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 AL353807.1-201ENST00000427475 662 ntBASIC18.32■□□□□ 0.52
H3F3CQ6NXT2 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
H3F3CQ6NXT2 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
H3F3CQ6NXT2 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC18.32■□□□□ 0.52
H3F3CQ6NXT2 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC18.32■□□□□ 0.52
H3F3CQ6NXT2 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
H3F3CQ6NXT2 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
H3F3CQ6NXT2 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
H3F3CQ6NXT2 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC18.32■□□□□ 0.52
H3F3CQ6NXT2 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.31■□□□□ 0.52
H3F3CQ6NXT2 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
H3F3CQ6NXT2 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
H3F3CQ6NXT2 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
H3F3CQ6NXT2 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
H3F3CQ6NXT2 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC18.31■□□□□ 0.52
H3F3CQ6NXT2 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC18.31■□□□□ 0.52
H3F3CQ6NXT2 TSPY7P-201ENST00000431358 1114 ntBASIC18.31■□□□□ 0.52
H3F3CQ6NXT2 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC18.31■□□□□ 0.52
H3F3CQ6NXT2 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
H3F3CQ6NXT2 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC18.31■□□□□ 0.52
H3F3CQ6NXT2 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC18.31■□□□□ 0.52
H3F3CQ6NXT2 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
H3F3CQ6NXT2 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
H3F3CQ6NXT2 AF186192.3-201ENST00000583427 947 ntBASIC18.31■□□□□ 0.52
H3F3CQ6NXT2 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC18.31■□□□□ 0.52
H3F3CQ6NXT2 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
H3F3CQ6NXT2 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.31■□□□□ 0.52
H3F3CQ6NXT2 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC18.31■□□□□ 0.52
H3F3CQ6NXT2 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
H3F3CQ6NXT2 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
H3F3CQ6NXT2 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
H3F3CQ6NXT2 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
H3F3CQ6NXT2 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
H3F3CQ6NXT2 AC116351.2-201ENST00000606540 1585 ntBASIC18.3■□□□□ 0.52
H3F3CQ6NXT2 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
H3F3CQ6NXT2 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
H3F3CQ6NXT2 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
H3F3CQ6NXT2 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC18.3■□□□□ 0.52
H3F3CQ6NXT2 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
H3F3CQ6NXT2 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
H3F3CQ6NXT2 SAPCD2P4-201ENST00000424595 1171 ntBASIC18.3■□□□□ 0.52
H3F3CQ6NXT2 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC18.3■□□□□ 0.52
H3F3CQ6NXT2 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
H3F3CQ6NXT2 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC18.3■□□□□ 0.52
H3F3CQ6NXT2 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC18.3■□□□□ 0.52
H3F3CQ6NXT2 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC18.3■□□□□ 0.52
H3F3CQ6NXT2 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC18.3■□□□□ 0.52
H3F3CQ6NXT2 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC18.3■□□□□ 0.52
H3F3CQ6NXT2 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
H3F3CQ6NXT2 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC18.3■□□□□ 0.52
H3F3CQ6NXT2 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
H3F3CQ6NXT2 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
H3F3CQ6NXT2 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
H3F3CQ6NXT2 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
H3F3CQ6NXT2 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC18.3■□□□□ 0.52
H3F3CQ6NXT2 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
H3F3CQ6NXT2 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
H3F3CQ6NXT2 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
H3F3CQ6NXT2 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
H3F3CQ6NXT2 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
H3F3CQ6NXT2 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
H3F3CQ6NXT2 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC18.29■□□□□ 0.52
H3F3CQ6NXT2 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC18.29■□□□□ 0.52
H3F3CQ6NXT2 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
H3F3CQ6NXT2 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
H3F3CQ6NXT2 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
H3F3CQ6NXT2 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC18.29■□□□□ 0.52
H3F3CQ6NXT2 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC18.29■□□□□ 0.52
H3F3CQ6NXT2 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
H3F3CQ6NXT2 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC18.29■□□□□ 0.52
H3F3CQ6NXT2 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
H3F3CQ6NXT2 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC18.29■□□□□ 0.52
H3F3CQ6NXT2 DHDH-203ENST00000522614 776 ntTSL 5 BASIC18.29■□□□□ 0.52
H3F3CQ6NXT2 MIR4785-201ENST00000585005 73 ntBASIC18.29■□□□□ 0.52
H3F3CQ6NXT2 AL353708.3-201ENST00000610272 989 ntBASIC18.29■□□□□ 0.52
H3F3CQ6NXT2 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
H3F3CQ6NXT2 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
H3F3CQ6NXT2 ME2-216ENST00000639850 2331 ntTSL 5 BASIC18.29■□□□□ 0.52
H3F3CQ6NXT2 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
H3F3CQ6NXT2 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
H3F3CQ6NXT2 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
H3F3CQ6NXT2 TFP1-202ENST00000475455 1573 ntBASIC18.29■□□□□ 0.52
H3F3CQ6NXT2 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
H3F3CQ6NXT2 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
H3F3CQ6NXT2 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
H3F3CQ6NXT2 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
H3F3CQ6NXT2 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
H3F3CQ6NXT2 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
H3F3CQ6NXT2 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
H3F3CQ6NXT2 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
H3F3CQ6NXT2 GXYLT1P3-201ENST00000453058 1193 ntBASIC18.28■□□□□ 0.52
H3F3CQ6NXT2 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC18.28■□□□□ 0.52
H3F3CQ6NXT2 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC18.28■□□□□ 0.52
H3F3CQ6NXT2 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC18.28■□□□□ 0.52
H3F3CQ6NXT2 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
H3F3CQ6NXT2 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
H3F3CQ6NXT2 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC18.28■□□□□ 0.52
H3F3CQ6NXT2 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
H3F3CQ6NXT2 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
H3F3CQ6NXT2 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms