Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
ATPAF1Q5TC12 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC17.14■□□□□ 0.33
ATPAF1Q5TC12 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ATPAF1Q5TC12 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC17.14■□□□□ 0.33
ATPAF1Q5TC12 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
ATPAF1Q5TC12 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ATPAF1Q5TC12 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ATPAF1Q5TC12 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ATPAF1Q5TC12 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
ATPAF1Q5TC12 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC17.13■□□□□ 0.33
ATPAF1Q5TC12 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
ATPAF1Q5TC12 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ATPAF1Q5TC12 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
ATPAF1Q5TC12 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
ATPAF1Q5TC12 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ATPAF1Q5TC12 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
ATPAF1Q5TC12 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ATPAF1Q5TC12 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC17.13■□□□□ 0.33
ATPAF1Q5TC12 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ATPAF1Q5TC12 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ATPAF1Q5TC12 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
ATPAF1Q5TC12 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC17.13■□□□□ 0.33
ATPAF1Q5TC12 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ATPAF1Q5TC12 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ATPAF1Q5TC12 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
ATPAF1Q5TC12 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
ATPAF1Q5TC12 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ATPAF1Q5TC12 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC17.13■□□□□ 0.33
ATPAF1Q5TC12 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ATPAF1Q5TC12 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ATPAF1Q5TC12 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ATPAF1Q5TC12 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ATPAF1Q5TC12 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
ATPAF1Q5TC12 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ATPAF1Q5TC12 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
ATPAF1Q5TC12 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
ATPAF1Q5TC12 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.12■□□□□ 0.33
ATPAF1Q5TC12 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATPAF1Q5TC12 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC17.12■□□□□ 0.33
ATPAF1Q5TC12 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATPAF1Q5TC12 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ATPAF1Q5TC12 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC17.12■□□□□ 0.33
ATPAF1Q5TC12 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATPAF1Q5TC12 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ATPAF1Q5TC12 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATPAF1Q5TC12 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ATPAF1Q5TC12 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATPAF1Q5TC12 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATPAF1Q5TC12 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATPAF1Q5TC12 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC17.12■□□□□ 0.33
ATPAF1Q5TC12 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC17.12■□□□□ 0.33
ATPAF1Q5TC12 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC17.12■□□□□ 0.33
ATPAF1Q5TC12 PPP1R14BP3-201ENST00000509033 445 ntBASIC17.12■□□□□ 0.33
ATPAF1Q5TC12 AL050303.2-201ENST00000619798 666 ntBASIC17.12■□□□□ 0.33
ATPAF1Q5TC12 AC005332.7-201ENST00000614046 2005 ntBASIC17.12■□□□□ 0.33
ATPAF1Q5TC12 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC17.12■□□□□ 0.33
ATPAF1Q5TC12 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC17.12■□□□□ 0.33
ATPAF1Q5TC12 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.12■□□□□ 0.33
ATPAF1Q5TC12 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ATPAF1Q5TC12 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATPAF1Q5TC12 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
ATPAF1Q5TC12 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
ATPAF1Q5TC12 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATPAF1Q5TC12 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
ATPAF1Q5TC12 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC17.12■□□□□ 0.33
ATPAF1Q5TC12 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ATPAF1Q5TC12 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
ATPAF1Q5TC12 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATPAF1Q5TC12 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATPAF1Q5TC12 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ATPAF1Q5TC12 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ATPAF1Q5TC12 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
ATPAF1Q5TC12 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ATPAF1Q5TC12 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ATPAF1Q5TC12 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
ATPAF1Q5TC12 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC17.11■□□□□ 0.33
ATPAF1Q5TC12 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ATPAF1Q5TC12 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
ATPAF1Q5TC12 MIR663A-201ENST00000385250 93 ntBASIC17.11■□□□□ 0.33
ATPAF1Q5TC12 AC006970.2-201ENST00000450065 779 ntBASIC17.11■□□□□ 0.33
ATPAF1Q5TC12 OAS3-207ENST00000551007 998 ntTSL 2 BASIC17.11■□□□□ 0.33
ATPAF1Q5TC12 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC17.11■□□□□ 0.33
ATPAF1Q5TC12 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
ATPAF1Q5TC12 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ATPAF1Q5TC12 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
ATPAF1Q5TC12 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ATPAF1Q5TC12 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ATPAF1Q5TC12 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
ATPAF1Q5TC12 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
ATPAF1Q5TC12 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC17.11■□□□□ 0.33
ATPAF1Q5TC12 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC17.11■□□□□ 0.33
ATPAF1Q5TC12 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC17.11■□□□□ 0.33
ATPAF1Q5TC12 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ATPAF1Q5TC12 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
ATPAF1Q5TC12 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ATPAF1Q5TC12 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ATPAF1Q5TC12 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC17.1■□□□□ 0.33
ATPAF1Q5TC12 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
ATPAF1Q5TC12 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ATPAF1Q5TC12 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms