Protein–RNA interactions for Protein: Q56A73

SPIN4, Spindlin-4, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN4Q56A73 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SPIN4Q56A73 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC18.91■□□□□ 0.62
SPIN4Q56A73 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
SPIN4Q56A73 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SPIN4Q56A73 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
SPIN4Q56A73 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SPIN4Q56A73 MIPEPP3-201ENST00000412105 444 ntBASIC18.91■□□□□ 0.62
SPIN4Q56A73 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC18.91■□□□□ 0.62
SPIN4Q56A73 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC18.91■□□□□ 0.62
SPIN4Q56A73 AC083906.2-201ENST00000511578 360 ntBASIC18.91■□□□□ 0.62
SPIN4Q56A73 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC18.91■□□□□ 0.62
SPIN4Q56A73 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
SPIN4Q56A73 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC18.91■□□□□ 0.62
SPIN4Q56A73 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
SPIN4Q56A73 CRK-204ENST00000574295 1391 ntTSL 5 BASIC18.91■□□□□ 0.62
SPIN4Q56A73 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC18.91■□□□□ 0.62
SPIN4Q56A73 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SPIN4Q56A73 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SPIN4Q56A73 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC18.9■□□□□ 0.62
SPIN4Q56A73 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SPIN4Q56A73 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SPIN4Q56A73 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.9■□□□□ 0.62
SPIN4Q56A73 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
SPIN4Q56A73 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SPIN4Q56A73 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SPIN4Q56A73 POLI-202ENST00000406285 2030 ntTSL 2 BASIC18.9■□□□□ 0.62
SPIN4Q56A73 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SPIN4Q56A73 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
SPIN4Q56A73 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC18.9■□□□□ 0.62
SPIN4Q56A73 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC18.9■□□□□ 0.62
SPIN4Q56A73 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC18.9■□□□□ 0.62
SPIN4Q56A73 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
SPIN4Q56A73 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SPIN4Q56A73 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
SPIN4Q56A73 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SPIN4Q56A73 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
SPIN4Q56A73 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SPIN4Q56A73 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC18.9■□□□□ 0.62
SPIN4Q56A73 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SPIN4Q56A73 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
SPIN4Q56A73 AC007952.6-201ENST00000573168 2673 ntBASIC18.89■□□□□ 0.62
SPIN4Q56A73 AC003957.1-201ENST00000625108 2673 ntBASIC18.89■□□□□ 0.62
SPIN4Q56A73 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
SPIN4Q56A73 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
SPIN4Q56A73 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SPIN4Q56A73 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
SPIN4Q56A73 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC18.89■□□□□ 0.61
SPIN4Q56A73 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SPIN4Q56A73 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SPIN4Q56A73 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SPIN4Q56A73 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SPIN4Q56A73 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SPIN4Q56A73 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SPIN4Q56A73 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
SPIN4Q56A73 SLC29A4P1-201ENST00000398760 971 ntBASIC18.89■□□□□ 0.61
SPIN4Q56A73 AL390719.1-204ENST00000412397 1219 ntBASIC18.89■□□□□ 0.61
SPIN4Q56A73 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC18.89■□□□□ 0.61
SPIN4Q56A73 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
SPIN4Q56A73 NME6-213ENST00000451657 871 ntTSL 2 BASIC18.89■□□□□ 0.61
SPIN4Q56A73 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC18.89■□□□□ 0.61
SPIN4Q56A73 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC18.89■□□□□ 0.61
SPIN4Q56A73 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SPIN4Q56A73 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC18.89■□□□□ 0.61
SPIN4Q56A73 AC092118.2-201ENST00000613495 667 ntBASIC18.89■□□□□ 0.61
SPIN4Q56A73 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC18.89■□□□□ 0.61
SPIN4Q56A73 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
SPIN4Q56A73 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SPIN4Q56A73 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SPIN4Q56A73 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
SPIN4Q56A73 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.89■□□□□ 0.61
SPIN4Q56A73 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SPIN4Q56A73 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SPIN4Q56A73 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.89■□□□□ 0.61
SPIN4Q56A73 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SPIN4Q56A73 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
SPIN4Q56A73 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SPIN4Q56A73 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
SPIN4Q56A73 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SPIN4Q56A73 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.88■□□□□ 0.61
SPIN4Q56A73 DUSP5P2-201ENST00000426873 1033 ntBASIC18.88■□□□□ 0.61
SPIN4Q56A73 AC073210.2-201ENST00000430369 194 ntBASIC18.88■□□□□ 0.61
SPIN4Q56A73 PPP1R14BP3-201ENST00000509033 445 ntBASIC18.88■□□□□ 0.61
SPIN4Q56A73 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
SPIN4Q56A73 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC18.88■□□□□ 0.61
SPIN4Q56A73 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SPIN4Q56A73 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC18.88■□□□□ 0.61
SPIN4Q56A73 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
SPIN4Q56A73 RNF165-205ENST00000588679 2904 ntBASIC18.88■□□□□ 0.61
SPIN4Q56A73 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SPIN4Q56A73 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SPIN4Q56A73 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC18.88■□□□□ 0.61
SPIN4Q56A73 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
SPIN4Q56A73 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SPIN4Q56A73 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
SPIN4Q56A73 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC18.87■□□□□ 0.61
SPIN4Q56A73 MFF-205ENST00000354503 1085 ntTSL 2 BASIC18.87■□□□□ 0.61
SPIN4Q56A73 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SPIN4Q56A73 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.87■□□□□ 0.61
SPIN4Q56A73 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SPIN4Q56A73 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms