Protein–RNA interactions for Protein: Q53FP2

TMEM35A, Transmembrane protein 35A, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM35AQ53FP2 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TMEM35AQ53FP2 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
TMEM35AQ53FP2 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
TMEM35AQ53FP2 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC18.84■□□□□ 0.61
TMEM35AQ53FP2 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.84■□□□□ 0.61
TMEM35AQ53FP2 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.84■□□□□ 0.61
TMEM35AQ53FP2 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
TMEM35AQ53FP2 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
TMEM35AQ53FP2 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TMEM35AQ53FP2 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TMEM35AQ53FP2 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TMEM35AQ53FP2 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.61
TMEM35AQ53FP2 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TMEM35AQ53FP2 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
TMEM35AQ53FP2 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC18.83■□□□□ 0.6
TMEM35AQ53FP2 UNC93B5-201ENST00000530315 699 ntBASIC18.83■□□□□ 0.6
TMEM35AQ53FP2 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
TMEM35AQ53FP2 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC18.83■□□□□ 0.6
TMEM35AQ53FP2 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
TMEM35AQ53FP2 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC18.83■□□□□ 0.6
TMEM35AQ53FP2 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC18.83■□□□□ 0.6
TMEM35AQ53FP2 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.83■□□□□ 0.6
TMEM35AQ53FP2 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC18.83■□□□□ 0.6
TMEM35AQ53FP2 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TMEM35AQ53FP2 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
TMEM35AQ53FP2 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC18.83■□□□□ 0.6
TMEM35AQ53FP2 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
TMEM35AQ53FP2 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC18.83■□□□□ 0.6
TMEM35AQ53FP2 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC18.83■□□□□ 0.6
TMEM35AQ53FP2 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TMEM35AQ53FP2 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC18.83■□□□□ 0.6
TMEM35AQ53FP2 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TMEM35AQ53FP2 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TMEM35AQ53FP2 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.82■□□□□ 0.6
TMEM35AQ53FP2 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC18.82■□□□□ 0.6
TMEM35AQ53FP2 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC18.82■□□□□ 0.6
TMEM35AQ53FP2 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
TMEM35AQ53FP2 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC18.82■□□□□ 0.6
TMEM35AQ53FP2 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
TMEM35AQ53FP2 AC008687.6-201ENST00000596318 630 ntBASIC18.82■□□□□ 0.6
TMEM35AQ53FP2 AL121906.2-201ENST00000621597 723 ntBASIC18.82■□□□□ 0.6
TMEM35AQ53FP2 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TMEM35AQ53FP2 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TMEM35AQ53FP2 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TMEM35AQ53FP2 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.82■□□□□ 0.6
TMEM35AQ53FP2 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TMEM35AQ53FP2 SLC25A24-204ENST00000569674 2357 ntBASIC18.82■□□□□ 0.6
TMEM35AQ53FP2 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
TMEM35AQ53FP2 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TMEM35AQ53FP2 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
TMEM35AQ53FP2 TFP1-202ENST00000475455 1573 ntBASIC18.81■□□□□ 0.6
TMEM35AQ53FP2 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TMEM35AQ53FP2 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC18.81■□□□□ 0.6
TMEM35AQ53FP2 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TMEM35AQ53FP2 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
TMEM35AQ53FP2 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.81■□□□□ 0.6
TMEM35AQ53FP2 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TMEM35AQ53FP2 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TMEM35AQ53FP2 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TMEM35AQ53FP2 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC18.81■□□□□ 0.6
TMEM35AQ53FP2 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TMEM35AQ53FP2 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC18.81■□□□□ 0.6
TMEM35AQ53FP2 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC18.81■□□□□ 0.6
TMEM35AQ53FP2 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TMEM35AQ53FP2 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC18.81■□□□□ 0.6
TMEM35AQ53FP2 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
TMEM35AQ53FP2 RNA5SP413-201ENST00000516373 109 ntBASIC18.81■□□□□ 0.6
TMEM35AQ53FP2 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC18.81■□□□□ 0.6
TMEM35AQ53FP2 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TMEM35AQ53FP2 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.81■□□□□ 0.6
TMEM35AQ53FP2 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC18.81■□□□□ 0.6
TMEM35AQ53FP2 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC18.81■□□□□ 0.6
TMEM35AQ53FP2 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TMEM35AQ53FP2 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
TMEM35AQ53FP2 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TMEM35AQ53FP2 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC18.8■□□□□ 0.6
TMEM35AQ53FP2 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.8■□□□□ 0.6
TMEM35AQ53FP2 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TMEM35AQ53FP2 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC18.8■□□□□ 0.6
TMEM35AQ53FP2 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC18.8■□□□□ 0.6
TMEM35AQ53FP2 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TMEM35AQ53FP2 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
TMEM35AQ53FP2 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TMEM35AQ53FP2 GAS7-202ENST00000396115 929 ntTSL 5 BASIC18.8■□□□□ 0.6
TMEM35AQ53FP2 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC18.8■□□□□ 0.6
TMEM35AQ53FP2 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC18.8■□□□□ 0.6
TMEM35AQ53FP2 KRT18P6-201ENST00000555540 1265 ntBASIC18.8■□□□□ 0.6
TMEM35AQ53FP2 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TMEM35AQ53FP2 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC18.8■□□□□ 0.6
TMEM35AQ53FP2 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TMEM35AQ53FP2 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC18.8■□□□□ 0.6
TMEM35AQ53FP2 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TMEM35AQ53FP2 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC18.8■□□□□ 0.6
TMEM35AQ53FP2 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC18.8■□□□□ 0.6
TMEM35AQ53FP2 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.8■□□□□ 0.6
TMEM35AQ53FP2 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC18.8■□□□□ 0.6
TMEM35AQ53FP2 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
TMEM35AQ53FP2 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TMEM35AQ53FP2 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TMEM35AQ53FP2 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms