Protein–RNA interactions for Protein: P98179

RBM3, RNA-binding protein 3, humanhuman

Known RBP Predictions only

Length 157 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBM3P98179 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RBM3P98179 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
RBM3P98179 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RBM3P98179 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RBM3P98179 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC12.49□□□□□ -0.41
RBM3P98179 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
RBM3P98179 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
RBM3P98179 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
RBM3P98179 AC133637.1-201ENST00000624115 1537 ntBASIC12.49□□□□□ -0.41
RBM3P98179 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RBM3P98179 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RBM3P98179 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
RBM3P98179 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RBM3P98179 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
RBM3P98179 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RBM3P98179 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC12.49□□□□□ -0.41
RBM3P98179 Z92544.1-202ENST00000571933 1220 ntBASIC12.49□□□□□ -0.41
RBM3P98179 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
RBM3P98179 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC12.49□□□□□ -0.41
RBM3P98179 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RBM3P98179 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RBM3P98179 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
RBM3P98179 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
RBM3P98179 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC12.49□□□□□ -0.41
RBM3P98179 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
RBM3P98179 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
RBM3P98179 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
RBM3P98179 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC12.49□□□□□ -0.41
RBM3P98179 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
RBM3P98179 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
RBM3P98179 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
RBM3P98179 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
RBM3P98179 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
RBM3P98179 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
RBM3P98179 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
RBM3P98179 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
RBM3P98179 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RBM3P98179 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC12.48□□□□□ -0.41
RBM3P98179 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
RBM3P98179 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
RBM3P98179 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC12.48□□□□□ -0.41
RBM3P98179 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RBM3P98179 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC12.48□□□□□ -0.41
RBM3P98179 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
RBM3P98179 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC12.48□□□□□ -0.41
RBM3P98179 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
RBM3P98179 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RBM3P98179 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RBM3P98179 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC12.48□□□□□ -0.41
RBM3P98179 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
RBM3P98179 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RBM3P98179 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RBM3P98179 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
RBM3P98179 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
RBM3P98179 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
RBM3P98179 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
RBM3P98179 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RBM3P98179 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
RBM3P98179 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
RBM3P98179 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
RBM3P98179 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
RBM3P98179 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC12.48□□□□□ -0.41
RBM3P98179 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC12.48□□□□□ -0.41
RBM3P98179 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC12.48□□□□□ -0.41
RBM3P98179 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC12.47□□□□□ -0.41
RBM3P98179 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RBM3P98179 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
RBM3P98179 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC12.47□□□□□ -0.41
RBM3P98179 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RBM3P98179 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
RBM3P98179 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC12.47□□□□□ -0.41
RBM3P98179 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RBM3P98179 STAC-204ENST00000457375 1366 ntTSL 2 BASIC12.47□□□□□ -0.41
RBM3P98179 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC12.47□□□□□ -0.41
RBM3P98179 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RBM3P98179 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RBM3P98179 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC12.47□□□□□ -0.41
RBM3P98179 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC12.47□□□□□ -0.41
RBM3P98179 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RBM3P98179 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC12.47□□□□□ -0.41
RBM3P98179 CLTA-210ENST00000540080 989 ntTSL 2 BASIC12.47□□□□□ -0.41
RBM3P98179 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
RBM3P98179 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC12.47□□□□□ -0.41
RBM3P98179 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
RBM3P98179 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
RBM3P98179 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
RBM3P98179 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RBM3P98179 AC018470.1-201ENST00000624790 3129 ntBASIC12.47□□□□□ -0.41
RBM3P98179 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RBM3P98179 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC12.47□□□□□ -0.41
RBM3P98179 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RBM3P98179 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
RBM3P98179 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RBM3P98179 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RBM3P98179 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
RBM3P98179 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
RBM3P98179 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC12.46□□□□□ -0.41
RBM3P98179 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
RBM3P98179 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
RBM3P98179 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms