Protein–RNA interactions for Protein: P56750

CLDN17, Claudin-17, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN17P56750 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLDN17P56750 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLDN17P56750 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CLDN17P56750 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC17.69■□□□□ 0.42
CLDN17P56750 OR2A1-AS1-207ENST00000486094 819 ntBASIC17.69■□□□□ 0.42
CLDN17P56750 HES2-206ENST00000489730 730 ntTSL 2 BASIC17.69■□□□□ 0.42
CLDN17P56750 SLC29A4P2-201ENST00000504749 1089 ntBASIC17.69■□□□□ 0.42
CLDN17P56750 RNA5SP413-201ENST00000516373 109 ntBASIC17.69■□□□□ 0.42
CLDN17P56750 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC17.69■□□□□ 0.42
CLDN17P56750 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC17.69■□□□□ 0.42
CLDN17P56750 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
CLDN17P56750 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLDN17P56750 GOLGA2P11-201ENST00000562660 1621 ntBASIC17.69■□□□□ 0.42
CLDN17P56750 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLDN17P56750 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC17.68■□□□□ 0.42
CLDN17P56750 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CLDN17P56750 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC17.68■□□□□ 0.42
CLDN17P56750 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLDN17P56750 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
CLDN17P56750 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLDN17P56750 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLDN17P56750 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLDN17P56750 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC17.68■□□□□ 0.42
CLDN17P56750 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLDN17P56750 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC17.68■□□□□ 0.42
CLDN17P56750 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
CLDN17P56750 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
CLDN17P56750 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC17.68■□□□□ 0.42
CLDN17P56750 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC17.68■□□□□ 0.42
CLDN17P56750 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLDN17P56750 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLDN17P56750 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC17.68■□□□□ 0.42
CLDN17P56750 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC17.68■□□□□ 0.42
CLDN17P56750 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CLDN17P56750 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CLDN17P56750 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLDN17P56750 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC17.67■□□□□ 0.42
CLDN17P56750 LBX2-AS1-202ENST00000603175 2083 ntBASIC17.67■□□□□ 0.42
CLDN17P56750 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC17.67■□□□□ 0.42
CLDN17P56750 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLDN17P56750 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLDN17P56750 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CLDN17P56750 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLDN17P56750 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC17.67■□□□□ 0.42
CLDN17P56750 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLDN17P56750 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC17.67■□□□□ 0.42
CLDN17P56750 SOX15-203ENST00000570788 1093 ntBASIC17.67■□□□□ 0.42
CLDN17P56750 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLDN17P56750 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC17.67■□□□□ 0.42
CLDN17P56750 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CLDN17P56750 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CLDN17P56750 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLDN17P56750 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLDN17P56750 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CLDN17P56750 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CLDN17P56750 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
CLDN17P56750 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLDN17P56750 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLDN17P56750 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLDN17P56750 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC17.66■□□□□ 0.42
CLDN17P56750 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC17.66■□□□□ 0.42
CLDN17P56750 PHGDH-210ENST00000641115 1638 ntBASIC17.66■□□□□ 0.42
CLDN17P56750 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC17.66■□□□□ 0.42
CLDN17P56750 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLDN17P56750 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLDN17P56750 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CLDN17P56750 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC17.66■□□□□ 0.42
CLDN17P56750 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CLDN17P56750 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC17.66■□□□□ 0.42
CLDN17P56750 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC17.66■□□□□ 0.42
CLDN17P56750 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC17.66■□□□□ 0.42
CLDN17P56750 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC17.66■□□□□ 0.42
CLDN17P56750 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CLDN17P56750 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC17.66■□□□□ 0.42
CLDN17P56750 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC17.66■□□□□ 0.42
CLDN17P56750 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC17.66■□□□□ 0.42
CLDN17P56750 KRT18P6-201ENST00000555540 1265 ntBASIC17.66■□□□□ 0.42
CLDN17P56750 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC17.66■□□□□ 0.42
CLDN17P56750 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC17.66■□□□□ 0.42
CLDN17P56750 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC17.66■□□□□ 0.42
CLDN17P56750 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
CLDN17P56750 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC17.66■□□□□ 0.42
CLDN17P56750 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC17.66■□□□□ 0.42
CLDN17P56750 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC17.66■□□□□ 0.42
CLDN17P56750 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC17.66■□□□□ 0.42
CLDN17P56750 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLDN17P56750 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLDN17P56750 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CLDN17P56750 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLDN17P56750 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC17.65■□□□□ 0.42
CLDN17P56750 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CLDN17P56750 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLDN17P56750 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC17.65■□□□□ 0.42
CLDN17P56750 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLDN17P56750 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CLDN17P56750 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLDN17P56750 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CLDN17P56750 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC17.65■□□□□ 0.42
CLDN17P56750 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC17.65■□□□□ 0.42
CLDN17P56750 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms