Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC22.95■■□□□ 1.26
HMGCS2P54868 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC22.95■■□□□ 1.26
HMGCS2P54868 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
HMGCS2P54868 RNF146-204ENST00000476956 884 ntTSL 2 BASIC22.95■■□□□ 1.26
HMGCS2P54868 DUX4L26-201ENST00000489078 1255 ntBASIC22.95■■□□□ 1.26
HMGCS2P54868 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
HMGCS2P54868 C2orf69P3-201ENST00000565542 1120 ntBASIC22.95■■□□□ 1.26
HMGCS2P54868 AP005242.2-201ENST00000580065 1175 ntBASIC22.95■■□□□ 1.26
HMGCS2P54868 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
HMGCS2P54868 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC22.95■■□□□ 1.26
HMGCS2P54868 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC22.95■■□□□ 1.26
HMGCS2P54868 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
HMGCS2P54868 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
HMGCS2P54868 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC22.94■■□□□ 1.26
HMGCS2P54868 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC22.94■■□□□ 1.26
HMGCS2P54868 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC22.94■■□□□ 1.26
HMGCS2P54868 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC22.94■■□□□ 1.26
HMGCS2P54868 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC22.94■■□□□ 1.26
HMGCS2P54868 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC22.94■■□□□ 1.26
HMGCS2P54868 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
HMGCS2P54868 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
HMGCS2P54868 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
HMGCS2P54868 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC22.94■■□□□ 1.26
HMGCS2P54868 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC22.94■■□□□ 1.26
HMGCS2P54868 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC22.94■■□□□ 1.26
HMGCS2P54868 GOLGA6L3-201ENST00000507199 1679 ntBASIC22.93■■□□□ 1.26
HMGCS2P54868 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
HMGCS2P54868 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
HMGCS2P54868 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
HMGCS2P54868 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC22.93■■□□□ 1.26
HMGCS2P54868 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC22.93■■□□□ 1.26
HMGCS2P54868 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
HMGCS2P54868 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC22.93■■□□□ 1.26
HMGCS2P54868 CRYGFP-201ENST00000418459 633 ntBASIC22.93■■□□□ 1.26
HMGCS2P54868 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC22.93■■□□□ 1.26
HMGCS2P54868 ECEL1P2-202ENST00000465689 757 ntBASIC22.93■■□□□ 1.26
HMGCS2P54868 AC097488.1-201ENST00000507834 756 ntBASIC22.93■■□□□ 1.26
HMGCS2P54868 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC22.93■■□□□ 1.26
HMGCS2P54868 NTF6B-201ENST00000591913 560 ntBASIC22.93■■□□□ 1.26
HMGCS2P54868 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC22.93■■□□□ 1.26
HMGCS2P54868 DGCR10-201ENST00000609839 495 ntBASIC22.93■■□□□ 1.26
HMGCS2P54868 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC22.93■■□□□ 1.26
HMGCS2P54868 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC22.93■■□□□ 1.26
HMGCS2P54868 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC22.93■■□□□ 1.26
HMGCS2P54868 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC22.93■■□□□ 1.26
HMGCS2P54868 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
HMGCS2P54868 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
HMGCS2P54868 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC22.93■■□□□ 1.26
HMGCS2P54868 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC22.92■■□□□ 1.26
HMGCS2P54868 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
HMGCS2P54868 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC22.92■■□□□ 1.26
HMGCS2P54868 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC22.92■■□□□ 1.26
HMGCS2P54868 AC131212.4-201ENST00000623606 975 ntBASIC22.92■■□□□ 1.26
HMGCS2P54868 AC092720.2-201ENST00000602388 1665 ntBASIC22.92■■□□□ 1.26
HMGCS2P54868 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC22.92■■□□□ 1.26
HMGCS2P54868 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC22.91■■□□□ 1.26
HMGCS2P54868 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC22.91■■□□□ 1.26
HMGCS2P54868 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
HMGCS2P54868 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
HMGCS2P54868 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
HMGCS2P54868 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC22.91■■□□□ 1.26
HMGCS2P54868 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC22.91■■□□□ 1.26
HMGCS2P54868 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
HMGCS2P54868 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
HMGCS2P54868 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC22.91■■□□□ 1.26
HMGCS2P54868 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC22.91■■□□□ 1.26
HMGCS2P54868 EGLN1P1-201ENST00000531623 762 ntBASIC22.91■■□□□ 1.26
HMGCS2P54868 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC22.91■■□□□ 1.26
HMGCS2P54868 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
HMGCS2P54868 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC22.91■■□□□ 1.26
HMGCS2P54868 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC22.91■■□□□ 1.26
HMGCS2P54868 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
HMGCS2P54868 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC22.91■■□□□ 1.26
HMGCS2P54868 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC22.91■■□□□ 1.26
HMGCS2P54868 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
HMGCS2P54868 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
HMGCS2P54868 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC22.91■■□□□ 1.26
HMGCS2P54868 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC22.9■■□□□ 1.26
HMGCS2P54868 PHGDH-210ENST00000641115 1638 ntBASIC22.9■■□□□ 1.26
HMGCS2P54868 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC22.9■■□□□ 1.26
HMGCS2P54868 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC22.9■■□□□ 1.26
HMGCS2P54868 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC22.9■■□□□ 1.26
HMGCS2P54868 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC22.9■■□□□ 1.26
HMGCS2P54868 AC026310.3-201ENST00000625186 2373 ntBASIC22.9■■□□□ 1.26
HMGCS2P54868 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC22.9■■□□□ 1.26
HMGCS2P54868 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
HMGCS2P54868 TSPY14P-201ENST00000303979 915 ntBASIC22.9■■□□□ 1.26
HMGCS2P54868 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
HMGCS2P54868 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
HMGCS2P54868 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC22.9■■□□□ 1.26
HMGCS2P54868 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
HMGCS2P54868 FDX2-206ENST00000492239 773 ntTSL 2 BASIC22.9■■□□□ 1.26
HMGCS2P54868 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
HMGCS2P54868 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC22.9■■□□□ 1.26
HMGCS2P54868 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
HMGCS2P54868 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
HMGCS2P54868 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC22.9■■□□□ 1.26
HMGCS2P54868 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC22.9■■□□□ 1.26
HMGCS2P54868 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC22.9■■□□□ 1.26
HMGCS2P54868 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms