Protein–RNA interactions for Protein: P54278

PMS2, Mismatch repair endonuclease PMS2, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P54278 AC073111.5-205ENST00000641717 521 ntBASIC20.41■□□□□ 0.86
PMS2P54278 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PMS2P54278 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PMS2P54278 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PMS2P54278 GOLGA2P11-201ENST00000562660 1621 ntBASIC20.41■□□□□ 0.86
PMS2P54278 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PMS2P54278 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC20.41■□□□□ 0.86
PMS2P54278 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PMS2P54278 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PMS2P54278 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PMS2P54278 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PMS2P54278 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PMS2P54278 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PMS2P54278 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PMS2P54278 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PMS2P54278 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PMS2P54278 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PMS2P54278 STX7-201ENST00000367937 1090 ntTSL 5 BASIC20.4■□□□□ 0.86
PMS2P54278 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC20.4■□□□□ 0.86
PMS2P54278 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PMS2P54278 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PMS2P54278 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC20.4■□□□□ 0.86
PMS2P54278 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
PMS2P54278 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC20.4■□□□□ 0.86
PMS2P54278 STX6-204ENST00000542060 4809 ntTSL 2 BASIC20.4■□□□□ 0.86
PMS2P54278 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC20.4■□□□□ 0.86
PMS2P54278 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC20.4■□□□□ 0.86
PMS2P54278 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC20.4■□□□□ 0.86
PMS2P54278 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
PMS2P54278 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC20.4■□□□□ 0.86
PMS2P54278 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PMS2P54278 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC20.4■□□□□ 0.86
PMS2P54278 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PMS2P54278 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PMS2P54278 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
PMS2P54278 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
PMS2P54278 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.86
PMS2P54278 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.86
PMS2P54278 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
PMS2P54278 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC20.39■□□□□ 0.86
PMS2P54278 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
PMS2P54278 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
PMS2P54278 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC20.39■□□□□ 0.86
PMS2P54278 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC20.39■□□□□ 0.86
PMS2P54278 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC20.39■□□□□ 0.86
PMS2P54278 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
PMS2P54278 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC20.39■□□□□ 0.86
PMS2P54278 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
PMS2P54278 AC009237.14-201ENST00000609975 1594 ntBASIC20.39■□□□□ 0.85
PMS2P54278 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
PMS2P54278 CDCA4P2-201ENST00000441182 718 ntBASIC20.39■□□□□ 0.85
PMS2P54278 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PMS2P54278 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
PMS2P54278 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PMS2P54278 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
PMS2P54278 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PMS2P54278 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
PMS2P54278 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PMS2P54278 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PMS2P54278 AC120498.9-201ENST00000339021 3867 ntBASIC20.38■□□□□ 0.85
PMS2P54278 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
PMS2P54278 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC20.38■□□□□ 0.85
PMS2P54278 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
PMS2P54278 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC20.38■□□□□ 0.85
PMS2P54278 TP73-202ENST00000354437 2140 ntTSL 5 BASIC20.38■□□□□ 0.85
PMS2P54278 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PMS2P54278 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
PMS2P54278 NEFHP1-201ENST00000412845 2629 ntBASIC20.38■□□□□ 0.85
PMS2P54278 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
PMS2P54278 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PMS2P54278 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PMS2P54278 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PMS2P54278 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PMS2P54278 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
PMS2P54278 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
PMS2P54278 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
PMS2P54278 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
PMS2P54278 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC20.38■□□□□ 0.85
PMS2P54278 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.38■□□□□ 0.85
PMS2P54278 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PMS2P54278 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC20.38■□□□□ 0.85
PMS2P54278 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PMS2P54278 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC20.38■□□□□ 0.85
PMS2P54278 AL032819.2-201ENST00000624543 2162 ntBASIC20.38■□□□□ 0.85
PMS2P54278 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
PMS2P54278 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
PMS2P54278 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
PMS2P54278 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC20.37■□□□□ 0.85
PMS2P54278 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PMS2P54278 AC004854.2-201ENST00000608450 1441 ntBASIC20.37■□□□□ 0.85
PMS2P54278 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC20.37■□□□□ 0.85
PMS2P54278 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC20.37■□□□□ 0.85
PMS2P54278 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PMS2P54278 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC20.37■□□□□ 0.85
PMS2P54278 AC243732.1-201ENST00000612648 864 ntBASIC20.37■□□□□ 0.85
PMS2P54278 GXYLT1P5-201ENST00000614548 1189 ntBASIC20.37■□□□□ 0.85
PMS2P54278 BID-214ENST00000617586 542 ntTSL 5 BASIC20.37■□□□□ 0.85
PMS2P54278 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC20.37■□□□□ 0.85
PMS2P54278 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
PMS2P54278 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms