Protein–RNA interactions for Protein: P54105

CLNS1A, Methylosome subunit pICln, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1AP54105 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLNS1AP54105 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLNS1AP54105 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
CLNS1AP54105 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC19.65■□□□□ 0.74
CLNS1AP54105 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC19.65■□□□□ 0.74
CLNS1AP54105 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
CLNS1AP54105 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CLNS1AP54105 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
CLNS1AP54105 AL512408.1-201ENST00000569378 2000 ntBASIC19.64■□□□□ 0.74
CLNS1AP54105 BCL2-203ENST00000589955 5011 ntBASIC19.64■□□□□ 0.74
CLNS1AP54105 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
CLNS1AP54105 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CLNS1AP54105 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CLNS1AP54105 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
CLNS1AP54105 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC19.64■□□□□ 0.73
CLNS1AP54105 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC19.64■□□□□ 0.73
CLNS1AP54105 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC19.64■□□□□ 0.73
CLNS1AP54105 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
CLNS1AP54105 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CLNS1AP54105 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CLNS1AP54105 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC19.64■□□□□ 0.73
CLNS1AP54105 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
CLNS1AP54105 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CLNS1AP54105 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
CLNS1AP54105 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLNS1AP54105 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.63■□□□□ 0.73
CLNS1AP54105 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLNS1AP54105 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLNS1AP54105 AIRN-201ENST00000601203 4374 ntBASIC19.63■□□□□ 0.73
CLNS1AP54105 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLNS1AP54105 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CLNS1AP54105 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC19.63■□□□□ 0.73
CLNS1AP54105 SUDS3P1-201ENST00000505831 966 ntBASIC19.63■□□□□ 0.73
CLNS1AP54105 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLNS1AP54105 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC19.63■□□□□ 0.73
CLNS1AP54105 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC19.63■□□□□ 0.73
CLNS1AP54105 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLNS1AP54105 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC19.63■□□□□ 0.73
CLNS1AP54105 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
CLNS1AP54105 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC19.63■□□□□ 0.73
CLNS1AP54105 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
CLNS1AP54105 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLNS1AP54105 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC19.62■□□□□ 0.73
CLNS1AP54105 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLNS1AP54105 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
CLNS1AP54105 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLNS1AP54105 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLNS1AP54105 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CLNS1AP54105 NME4-202ENST00000382940 766 ntTSL 3 BASIC19.62■□□□□ 0.73
CLNS1AP54105 AC245052.3-201ENST00000450182 901 ntBASIC19.62■□□□□ 0.73
CLNS1AP54105 NME4-211ENST00000620944 1193 ntTSL 2 BASIC19.62■□□□□ 0.73
CLNS1AP54105 AC120498.10-201ENST00000621827 505 ntBASIC19.62■□□□□ 0.73
CLNS1AP54105 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLNS1AP54105 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
CLNS1AP54105 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC19.62■□□□□ 0.73
CLNS1AP54105 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLNS1AP54105 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC19.62■□□□□ 0.73
CLNS1AP54105 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLNS1AP54105 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
CLNS1AP54105 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLNS1AP54105 KRT16P2-201ENST00000414673 1423 ntBASIC19.61■□□□□ 0.73
CLNS1AP54105 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLNS1AP54105 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
CLNS1AP54105 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLNS1AP54105 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
CLNS1AP54105 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLNS1AP54105 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC19.61■□□□□ 0.73
CLNS1AP54105 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC19.61■□□□□ 0.73
CLNS1AP54105 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC19.61■□□□□ 0.73
CLNS1AP54105 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC19.61■□□□□ 0.73
CLNS1AP54105 AC138907.5-202ENST00000569484 235 ntBASIC19.61■□□□□ 0.73
CLNS1AP54105 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLNS1AP54105 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLNS1AP54105 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
CLNS1AP54105 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLNS1AP54105 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLNS1AP54105 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLNS1AP54105 AC005332.7-201ENST00000614046 2005 ntBASIC19.61■□□□□ 0.73
CLNS1AP54105 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC19.6■□□□□ 0.73
CLNS1AP54105 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.6■□□□□ 0.73
CLNS1AP54105 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CLNS1AP54105 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC19.6■□□□□ 0.73
CLNS1AP54105 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLNS1AP54105 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLNS1AP54105 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLNS1AP54105 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLNS1AP54105 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLNS1AP54105 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLNS1AP54105 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLNS1AP54105 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.6■□□□□ 0.73
CLNS1AP54105 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CLNS1AP54105 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
CLNS1AP54105 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLNS1AP54105 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC19.6■□□□□ 0.73
CLNS1AP54105 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CLNS1AP54105 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.6■□□□□ 0.73
CLNS1AP54105 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLNS1AP54105 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CLNS1AP54105 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.59■□□□□ 0.73
CLNS1AP54105 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms