Protein–RNA interactions for Protein: P52799

EFNB2, Ephrin-B2, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB2P52799 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
EFNB2P52799 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
EFNB2P52799 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
EFNB2P52799 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC17.09■□□□□ 0.33
EFNB2P52799 AL032819.2-201ENST00000624543 2162 ntBASIC17.09■□□□□ 0.33
EFNB2P52799 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
EFNB2P52799 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
EFNB2P52799 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
EFNB2P52799 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
EFNB2P52799 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.33
EFNB2P52799 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC17.08■□□□□ 0.33
EFNB2P52799 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
EFNB2P52799 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
EFNB2P52799 AC009237.14-201ENST00000609975 1594 ntBASIC17.08■□□□□ 0.32
EFNB2P52799 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC17.08■□□□□ 0.32
EFNB2P52799 GAS2L1P2-201ENST00000436355 1356 ntBASIC17.08■□□□□ 0.32
EFNB2P52799 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
EFNB2P52799 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC17.08■□□□□ 0.32
EFNB2P52799 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC17.08■□□□□ 0.32
EFNB2P52799 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
EFNB2P52799 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
EFNB2P52799 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
EFNB2P52799 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC17.08■□□□□ 0.32
EFNB2P52799 ID1-201ENST00000376105 1233 ntBASIC17.08■□□□□ 0.32
EFNB2P52799 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
EFNB2P52799 HSCB-202ENST00000398941 955 ntTSL 2 BASIC17.08■□□□□ 0.32
EFNB2P52799 KRT19P1-201ENST00000405746 1186 ntBASIC17.08■□□□□ 0.32
EFNB2P52799 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC17.08■□□□□ 0.32
EFNB2P52799 AC080038.1-201ENST00000611274 1154 ntBASIC17.08■□□□□ 0.32
EFNB2P52799 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC17.08■□□□□ 0.32
EFNB2P52799 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
EFNB2P52799 STK25-205ENST00000405883 1904 ntTSL 2 BASIC17.08■□□□□ 0.32
EFNB2P52799 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC17.07■□□□□ 0.32
EFNB2P52799 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC17.07■□□□□ 0.32
EFNB2P52799 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
EFNB2P52799 GOLGA2P11-201ENST00000562660 1621 ntBASIC17.07■□□□□ 0.32
EFNB2P52799 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
EFNB2P52799 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC17.07■□□□□ 0.32
EFNB2P52799 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
EFNB2P52799 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
EFNB2P52799 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
EFNB2P52799 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC17.07■□□□□ 0.32
EFNB2P52799 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
EFNB2P52799 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
EFNB2P52799 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC17.07■□□□□ 0.32
EFNB2P52799 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC17.07■□□□□ 0.32
EFNB2P52799 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC17.07■□□□□ 0.32
EFNB2P52799 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
EFNB2P52799 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC17.07■□□□□ 0.32
EFNB2P52799 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
EFNB2P52799 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
EFNB2P52799 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC17.07■□□□□ 0.32
EFNB2P52799 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
EFNB2P52799 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
EFNB2P52799 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
EFNB2P52799 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC17.07■□□□□ 0.32
EFNB2P52799 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
EFNB2P52799 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
EFNB2P52799 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
EFNB2P52799 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
EFNB2P52799 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
EFNB2P52799 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
EFNB2P52799 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC17.06■□□□□ 0.32
EFNB2P52799 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
EFNB2P52799 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
EFNB2P52799 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
EFNB2P52799 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
EFNB2P52799 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC17.06■□□□□ 0.32
EFNB2P52799 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
EFNB2P52799 SAPCD2P1-201ENST00000395413 1184 ntBASIC17.06■□□□□ 0.32
EFNB2P52799 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC17.06■□□□□ 0.32
EFNB2P52799 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
EFNB2P52799 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC17.06■□□□□ 0.32
EFNB2P52799 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC17.06■□□□□ 0.32
EFNB2P52799 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
EFNB2P52799 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
EFNB2P52799 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
EFNB2P52799 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
EFNB2P52799 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
EFNB2P52799 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC17.06■□□□□ 0.32
EFNB2P52799 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
EFNB2P52799 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
EFNB2P52799 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
EFNB2P52799 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
EFNB2P52799 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
EFNB2P52799 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
EFNB2P52799 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
EFNB2P52799 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
EFNB2P52799 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC17.05■□□□□ 0.32
EFNB2P52799 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
EFNB2P52799 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
EFNB2P52799 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
EFNB2P52799 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
EFNB2P52799 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
EFNB2P52799 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
EFNB2P52799 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC17.05■□□□□ 0.32
EFNB2P52799 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
EFNB2P52799 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
EFNB2P52799 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
EFNB2P52799 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms