Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
RORAP35398 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
RORAP35398 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
RORAP35398 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC18.81■□□□□ 0.6
RORAP35398 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
RORAP35398 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RORAP35398 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
RORAP35398 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RORAP35398 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
RORAP35398 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
RORAP35398 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC18.81■□□□□ 0.6
RORAP35398 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC18.81■□□□□ 0.6
RORAP35398 DHDH-203ENST00000522614 776 ntTSL 5 BASIC18.81■□□□□ 0.6
RORAP35398 MIR4785-201ENST00000585005 73 ntBASIC18.81■□□□□ 0.6
RORAP35398 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RORAP35398 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RORAP35398 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RORAP35398 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RORAP35398 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
RORAP35398 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
RORAP35398 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
RORAP35398 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RORAP35398 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RORAP35398 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.81■□□□□ 0.6
RORAP35398 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC18.81■□□□□ 0.6
RORAP35398 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC18.8■□□□□ 0.6
RORAP35398 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC18.8■□□□□ 0.6
RORAP35398 HTR7P1-201ENST00000538670 1336 ntBASIC18.8■□□□□ 0.6
RORAP35398 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
RORAP35398 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC18.8■□□□□ 0.6
RORAP35398 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
RORAP35398 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RORAP35398 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC18.8■□□□□ 0.6
RORAP35398 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RORAP35398 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RORAP35398 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RORAP35398 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC18.8■□□□□ 0.6
RORAP35398 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC18.8■□□□□ 0.6
RORAP35398 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC18.8■□□□□ 0.6
RORAP35398 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC18.8■□□□□ 0.6
RORAP35398 AF186192.3-201ENST00000583427 947 ntBASIC18.8■□□□□ 0.6
RORAP35398 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
RORAP35398 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC18.8■□□□□ 0.6
RORAP35398 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RORAP35398 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RORAP35398 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC18.8■□□□□ 0.6
RORAP35398 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RORAP35398 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RORAP35398 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
RORAP35398 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.79■□□□□ 0.6
RORAP35398 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RORAP35398 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RORAP35398 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RORAP35398 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC18.79■□□□□ 0.6
RORAP35398 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.79■□□□□ 0.6
RORAP35398 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RORAP35398 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RORAP35398 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
RORAP35398 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RORAP35398 CALM3-202ENST00000391918 702 ntTSL 2 BASIC18.79■□□□□ 0.6
RORAP35398 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC18.79■□□□□ 0.6
RORAP35398 PENK-204ENST00000518770 863 ntTSL 2 BASIC18.79■□□□□ 0.6
RORAP35398 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC18.79■□□□□ 0.6
RORAP35398 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC18.79■□□□□ 0.6
RORAP35398 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC18.79■□□□□ 0.6
RORAP35398 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC18.79■□□□□ 0.6
RORAP35398 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC18.79■□□□□ 0.6
RORAP35398 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC18.79■□□□□ 0.6
RORAP35398 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
RORAP35398 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.79■□□□□ 0.6
RORAP35398 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RORAP35398 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
RORAP35398 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.79■□□□□ 0.6
RORAP35398 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RORAP35398 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.78■□□□□ 0.6
RORAP35398 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RORAP35398 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RORAP35398 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
RORAP35398 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC18.78■□□□□ 0.6
RORAP35398 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RORAP35398 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
RORAP35398 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RORAP35398 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RORAP35398 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC18.78■□□□□ 0.6
RORAP35398 SAPCD2P4-201ENST00000424595 1171 ntBASIC18.78■□□□□ 0.6
RORAP35398 AL353807.1-201ENST00000427475 662 ntBASIC18.78■□□□□ 0.6
RORAP35398 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
RORAP35398 BX088651.1-201ENST00000540551 451 ntBASIC18.78■□□□□ 0.6
RORAP35398 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
RORAP35398 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC18.78■□□□□ 0.6
RORAP35398 AC004264.1-201ENST00000608354 794 ntBASIC18.78■□□□□ 0.6
RORAP35398 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC18.78■□□□□ 0.6
RORAP35398 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC18.78■□□□□ 0.6
RORAP35398 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RORAP35398 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RORAP35398 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
RORAP35398 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RORAP35398 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RORAP35398 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RORAP35398 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms