Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RAB3BP20337 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
RAB3BP20337 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RAB3BP20337 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RAB3BP20337 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
RAB3BP20337 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RAB3BP20337 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
RAB3BP20337 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RAB3BP20337 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
RAB3BP20337 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC17.32■□□□□ 0.36
RAB3BP20337 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC17.32■□□□□ 0.36
RAB3BP20337 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RAB3BP20337 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RAB3BP20337 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
RAB3BP20337 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
RAB3BP20337 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RAB3BP20337 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RAB3BP20337 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RAB3BP20337 NT5C3AP1-201ENST00000394500 1012 ntBASIC17.32■□□□□ 0.36
RAB3BP20337 AC091799.1-201ENST00000422823 811 ntBASIC17.32■□□□□ 0.36
RAB3BP20337 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RAB3BP20337 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
RAB3BP20337 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
RAB3BP20337 AC090340.1-201ENST00000620778 4980 ntBASIC17.32■□□□□ 0.36
RAB3BP20337 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC17.32■□□□□ 0.36
RAB3BP20337 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RAB3BP20337 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RAB3BP20337 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RAB3BP20337 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
RAB3BP20337 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17.32■□□□□ 0.36
RAB3BP20337 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RAB3BP20337 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RAB3BP20337 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
RAB3BP20337 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RAB3BP20337 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RAB3BP20337 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAB3BP20337 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
RAB3BP20337 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAB3BP20337 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
RAB3BP20337 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RAB3BP20337 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAB3BP20337 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RAB3BP20337 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAB3BP20337 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RAB3BP20337 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RAB3BP20337 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC17.31■□□□□ 0.36
RAB3BP20337 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAB3BP20337 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAB3BP20337 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAB3BP20337 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RAB3BP20337 SLC7A5P2-201ENST00000553010 536 ntBASIC17.31■□□□□ 0.36
RAB3BP20337 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RAB3BP20337 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC17.31■□□□□ 0.36
RAB3BP20337 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAB3BP20337 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC17.31■□□□□ 0.36
RAB3BP20337 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RAB3BP20337 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RAB3BP20337 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAB3BP20337 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RAB3BP20337 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC17.31■□□□□ 0.36
RAB3BP20337 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RAB3BP20337 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
RAB3BP20337 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAB3BP20337 ADK-206ENST00000541550 2222 ntTSL 2 BASIC17.31■□□□□ 0.36
RAB3BP20337 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAB3BP20337 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC17.31■□□□□ 0.36
RAB3BP20337 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
RAB3BP20337 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC17.3■□□□□ 0.36
RAB3BP20337 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC17.3■□□□□ 0.36
RAB3BP20337 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.3■□□□□ 0.36
RAB3BP20337 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC17.3■□□□□ 0.36
RAB3BP20337 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
RAB3BP20337 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RAB3BP20337 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC17.3■□□□□ 0.36
RAB3BP20337 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RAB3BP20337 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RAB3BP20337 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC17.3■□□□□ 0.36
RAB3BP20337 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC17.3■□□□□ 0.36
RAB3BP20337 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC17.3■□□□□ 0.36
RAB3BP20337 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
RAB3BP20337 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RAB3BP20337 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RAB3BP20337 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC17.3■□□□□ 0.36
RAB3BP20337 AL354811.1-201ENST00000610286 706 ntBASIC17.3■□□□□ 0.36
RAB3BP20337 GRAMD4P4-201ENST00000613563 1115 ntBASIC17.3■□□□□ 0.36
RAB3BP20337 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
RAB3BP20337 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
RAB3BP20337 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
RAB3BP20337 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
RAB3BP20337 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.3■□□□□ 0.36
RAB3BP20337 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
RAB3BP20337 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
RAB3BP20337 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RAB3BP20337 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAB3BP20337 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC17.29■□□□□ 0.36
RAB3BP20337 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAB3BP20337 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
RAB3BP20337 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAB3BP20337 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RAB3BP20337 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms