Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NFKB1P19838 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NFKB1P19838 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
NFKB1P19838 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC20.15■□□□□ 0.82
NFKB1P19838 HLA-B-256ENST00000639848 1089 ntBASIC20.15■□□□□ 0.82
NFKB1P19838 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NFKB1P19838 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC20.15■□□□□ 0.82
NFKB1P19838 AC092368.3-202ENST00000574180 1591 ntBASIC20.15■□□□□ 0.82
NFKB1P19838 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NFKB1P19838 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
NFKB1P19838 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NFKB1P19838 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
NFKB1P19838 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
NFKB1P19838 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC20.15■□□□□ 0.82
NFKB1P19838 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NFKB1P19838 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NFKB1P19838 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20.15■□□□□ 0.82
NFKB1P19838 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
NFKB1P19838 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
NFKB1P19838 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC20.14■□□□□ 0.81
NFKB1P19838 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
NFKB1P19838 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
NFKB1P19838 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NFKB1P19838 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC20.14■□□□□ 0.81
NFKB1P19838 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC20.14■□□□□ 0.81
NFKB1P19838 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC20.14■□□□□ 0.81
NFKB1P19838 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC20.14■□□□□ 0.81
NFKB1P19838 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
NFKB1P19838 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
NFKB1P19838 RER1-204ENST00000378518 522 ntTSL 3 BASIC20.14■□□□□ 0.81
NFKB1P19838 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
NFKB1P19838 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC20.14■□□□□ 0.81
NFKB1P19838 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
NFKB1P19838 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC20.14■□□□□ 0.81
NFKB1P19838 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.13■□□□□ 0.81
NFKB1P19838 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
NFKB1P19838 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
NFKB1P19838 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
NFKB1P19838 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.13■□□□□ 0.81
NFKB1P19838 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
NFKB1P19838 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
NFKB1P19838 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC20.13■□□□□ 0.81
NFKB1P19838 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC20.13■□□□□ 0.81
NFKB1P19838 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
NFKB1P19838 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC20.13■□□□□ 0.81
NFKB1P19838 AC060766.5-201ENST00000590539 871 ntBASIC20.13■□□□□ 0.81
NFKB1P19838 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
NFKB1P19838 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
NFKB1P19838 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.13■□□□□ 0.81
NFKB1P19838 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC20.13■□□□□ 0.81
NFKB1P19838 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC20.13■□□□□ 0.81
NFKB1P19838 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
NFKB1P19838 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
NFKB1P19838 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
NFKB1P19838 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
NFKB1P19838 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
NFKB1P19838 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
NFKB1P19838 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
NFKB1P19838 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.12■□□□□ 0.81
NFKB1P19838 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC20.12■□□□□ 0.81
NFKB1P19838 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC20.12■□□□□ 0.81
NFKB1P19838 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
NFKB1P19838 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
NFKB1P19838 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
NFKB1P19838 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
NFKB1P19838 ID1-201ENST00000376105 1233 ntBASIC20.12■□□□□ 0.81
NFKB1P19838 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC20.12■□□□□ 0.81
NFKB1P19838 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC20.12■□□□□ 0.81
NFKB1P19838 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC20.12■□□□□ 0.81
NFKB1P19838 PNMA6B-201ENST00000538162 1200 ntBASIC20.12■□□□□ 0.81
NFKB1P19838 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
NFKB1P19838 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
NFKB1P19838 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
NFKB1P19838 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
NFKB1P19838 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC20.12■□□□□ 0.81
NFKB1P19838 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC20.12■□□□□ 0.81
NFKB1P19838 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC20.12■□□□□ 0.81
NFKB1P19838 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
NFKB1P19838 AC018553.1-201ENST00000616682 1458 ntBASIC20.11■□□□□ 0.81
NFKB1P19838 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
NFKB1P19838 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
NFKB1P19838 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC20.11■□□□□ 0.81
NFKB1P19838 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.11■□□□□ 0.81
NFKB1P19838 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
NFKB1P19838 TREX1-205ENST00000625293 1783 ntBASIC20.11■□□□□ 0.81
NFKB1P19838 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC20.11■□□□□ 0.81
NFKB1P19838 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
NFKB1P19838 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.11■□□□□ 0.81
NFKB1P19838 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
NFKB1P19838 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
NFKB1P19838 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
NFKB1P19838 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
NFKB1P19838 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC20.11■□□□□ 0.81
NFKB1P19838 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
NFKB1P19838 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC20.11■□□□□ 0.81
NFKB1P19838 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC20.11■□□□□ 0.81
NFKB1P19838 SLC29A4P2-201ENST00000504749 1089 ntBASIC20.11■□□□□ 0.81
NFKB1P19838 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC20.11■□□□□ 0.81
NFKB1P19838 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
NFKB1P19838 REXO2-208ENST00000539754 791 ntTSL 2 BASIC20.11■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms