Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 CD44-222ENST00000526025 1052 ntTSL 2 BASIC18.69■□□□□ 0.58
NCK1P16333 TESC-206ENST00000541210 936 ntTSL 3 BASIC18.69■□□□□ 0.58
NCK1P16333 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
NCK1P16333 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NCK1P16333 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NCK1P16333 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
NCK1P16333 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC18.69■□□□□ 0.58
NCK1P16333 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
NCK1P16333 AC019069.1-201ENST00000610008 1333 ntBASIC18.69■□□□□ 0.58
NCK1P16333 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
NCK1P16333 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NCK1P16333 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NCK1P16333 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
NCK1P16333 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
NCK1P16333 LINC02228-203ENST00000641970 1355 ntBASIC18.68■□□□□ 0.58
NCK1P16333 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
NCK1P16333 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NCK1P16333 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC18.68■□□□□ 0.58
NCK1P16333 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC18.68■□□□□ 0.58
NCK1P16333 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NCK1P16333 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
NCK1P16333 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
NCK1P16333 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
NCK1P16333 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
NCK1P16333 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC18.68■□□□□ 0.58
NCK1P16333 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
NCK1P16333 VMO1-204ENST00000441199 741 ntTSL 2 BASIC18.68■□□□□ 0.58
NCK1P16333 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC18.68■□□□□ 0.58
NCK1P16333 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC18.68■□□□□ 0.58
NCK1P16333 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC18.68■□□□□ 0.58
NCK1P16333 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC18.68■□□□□ 0.58
NCK1P16333 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
NCK1P16333 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
NCK1P16333 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
NCK1P16333 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
NCK1P16333 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.68■□□□□ 0.58
NCK1P16333 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NCK1P16333 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.68■□□□□ 0.58
NCK1P16333 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC18.68■□□□□ 0.58
NCK1P16333 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NCK1P16333 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NCK1P16333 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
NCK1P16333 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
NCK1P16333 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC18.67■□□□□ 0.58
NCK1P16333 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
NCK1P16333 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
NCK1P16333 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
NCK1P16333 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC18.67■□□□□ 0.58
NCK1P16333 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NCK1P16333 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NCK1P16333 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.67■□□□□ 0.58
NCK1P16333 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
NCK1P16333 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC18.67■□□□□ 0.58
NCK1P16333 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
NCK1P16333 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
NCK1P16333 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NCK1P16333 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NCK1P16333 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC18.67■□□□□ 0.58
NCK1P16333 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
NCK1P16333 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NCK1P16333 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
NCK1P16333 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
NCK1P16333 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
NCK1P16333 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NCK1P16333 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.67■□□□□ 0.58
NCK1P16333 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NCK1P16333 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NCK1P16333 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NCK1P16333 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
NCK1P16333 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NCK1P16333 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC18.67■□□□□ 0.58
NCK1P16333 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC18.66■□□□□ 0.58
NCK1P16333 AC087633.2-202ENST00000565166 1439 ntBASIC18.66■□□□□ 0.58
NCK1P16333 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NCK1P16333 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
NCK1P16333 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC18.66■□□□□ 0.58
NCK1P16333 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC18.66■□□□□ 0.58
NCK1P16333 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
NCK1P16333 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NCK1P16333 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NCK1P16333 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NCK1P16333 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NCK1P16333 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC18.66■□□□□ 0.58
NCK1P16333 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
NCK1P16333 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NCK1P16333 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC18.66■□□□□ 0.58
NCK1P16333 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC18.66■□□□□ 0.58
NCK1P16333 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NCK1P16333 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NCK1P16333 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.66■□□□□ 0.58
NCK1P16333 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NCK1P16333 PTBP1P-201ENST00000554374 1601 ntBASIC18.66■□□□□ 0.58
NCK1P16333 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NCK1P16333 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NCK1P16333 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NCK1P16333 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NCK1P16333 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.65■□□□□ 0.58
NCK1P16333 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.65■□□□□ 0.58
NCK1P16333 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.65■□□□□ 0.58
NCK1P16333 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms