Protein–RNA interactions for Protein: P0DL12

SMIM17, Small integral membrane protein 17, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM17P0DL12 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SMIM17P0DL12 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
SMIM17P0DL12 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SMIM17P0DL12 MIR572-201ENST00000384983 95 ntBASIC14.72□□□□□ -0.05
SMIM17P0DL12 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC14.72□□□□□ -0.05
SMIM17P0DL12 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC14.72□□□□□ -0.05
SMIM17P0DL12 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SMIM17P0DL12 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC14.72□□□□□ -0.05
SMIM17P0DL12 LTB4R2-202ENST00000528054 3092 ntBASIC14.72□□□□□ -0.05
SMIM17P0DL12 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SMIM17P0DL12 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
SMIM17P0DL12 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC14.72□□□□□ -0.05
SMIM17P0DL12 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SMIM17P0DL12 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SMIM17P0DL12 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
SMIM17P0DL12 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
SMIM17P0DL12 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SMIM17P0DL12 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
SMIM17P0DL12 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
SMIM17P0DL12 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC14.71□□□□□ -0.05
SMIM17P0DL12 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC14.71□□□□□ -0.05
SMIM17P0DL12 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC14.71□□□□□ -0.05
SMIM17P0DL12 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC14.71□□□□□ -0.05
SMIM17P0DL12 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
SMIM17P0DL12 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.05
SMIM17P0DL12 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
SMIM17P0DL12 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
SMIM17P0DL12 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC14.71□□□□□ -0.05
SMIM17P0DL12 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
SMIM17P0DL12 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC14.71□□□□□ -0.05
SMIM17P0DL12 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
SMIM17P0DL12 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
SMIM17P0DL12 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC14.71□□□□□ -0.05
SMIM17P0DL12 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SMIM17P0DL12 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
SMIM17P0DL12 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
SMIM17P0DL12 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
SMIM17P0DL12 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SMIM17P0DL12 TNXA-203ENST00000507684 2038 ntBASIC14.71□□□□□ -0.05
SMIM17P0DL12 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC14.71□□□□□ -0.06
SMIM17P0DL12 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
SMIM17P0DL12 AC004408.2-201ENST00000623613 2777 ntBASIC14.71□□□□□ -0.06
SMIM17P0DL12 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
SMIM17P0DL12 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
SMIM17P0DL12 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
SMIM17P0DL12 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC14.7□□□□□ -0.06
SMIM17P0DL12 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
SMIM17P0DL12 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SMIM17P0DL12 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
SMIM17P0DL12 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
SMIM17P0DL12 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SMIM17P0DL12 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
SMIM17P0DL12 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
SMIM17P0DL12 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC14.7□□□□□ -0.06
SMIM17P0DL12 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
SMIM17P0DL12 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
SMIM17P0DL12 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SMIM17P0DL12 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
SMIM17P0DL12 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SMIM17P0DL12 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SMIM17P0DL12 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SMIM17P0DL12 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC14.7□□□□□ -0.06
SMIM17P0DL12 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SMIM17P0DL12 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC14.7□□□□□ -0.06
SMIM17P0DL12 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
SMIM17P0DL12 GRAMD4P4-201ENST00000613563 1115 ntBASIC14.7□□□□□ -0.06
SMIM17P0DL12 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC14.7□□□□□ -0.06
SMIM17P0DL12 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
SMIM17P0DL12 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC14.7□□□□□ -0.06
SMIM17P0DL12 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SMIM17P0DL12 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC14.7□□□□□ -0.06
SMIM17P0DL12 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
SMIM17P0DL12 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC14.7□□□□□ -0.06
SMIM17P0DL12 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SMIM17P0DL12 AC116050.2-201ENST00000612102 1779 ntBASIC14.7□□□□□ -0.06
SMIM17P0DL12 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SMIM17P0DL12 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SMIM17P0DL12 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SMIM17P0DL12 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC14.7□□□□□ -0.06
SMIM17P0DL12 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SMIM17P0DL12 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SMIM17P0DL12 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
SMIM17P0DL12 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
SMIM17P0DL12 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC14.69□□□□□ -0.06
SMIM17P0DL12 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SMIM17P0DL12 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
SMIM17P0DL12 KRT16P2-201ENST00000414673 1423 ntBASIC14.69□□□□□ -0.06
SMIM17P0DL12 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SMIM17P0DL12 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
SMIM17P0DL12 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC14.69□□□□□ -0.06
SMIM17P0DL12 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC14.69□□□□□ -0.06
SMIM17P0DL12 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SMIM17P0DL12 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SMIM17P0DL12 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SMIM17P0DL12 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SMIM17P0DL12 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
SMIM17P0DL12 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
SMIM17P0DL12 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SMIM17P0DL12 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SMIM17P0DL12 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms