Protein–RNA interactions for Protein: P02776

PF4, Platelet factor 4, humanhuman

Predictions only

Length 101 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PF4P02776 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PF4P02776 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC15.3■□□□□ 0.04
PF4P02776 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PF4P02776 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PF4P02776 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PF4P02776 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PF4P02776 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
PF4P02776 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
PF4P02776 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC15.29■□□□□ 0.04
PF4P02776 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PF4P02776 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PF4P02776 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PF4P02776 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC15.29■□□□□ 0.04
PF4P02776 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC15.29■□□□□ 0.04
PF4P02776 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC15.29■□□□□ 0.04
PF4P02776 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PF4P02776 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
PF4P02776 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC15.29■□□□□ 0.04
PF4P02776 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC15.29■□□□□ 0.04
PF4P02776 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PF4P02776 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PF4P02776 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC15.29■□□□□ 0.04
PF4P02776 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC15.29■□□□□ 0.04
PF4P02776 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
PF4P02776 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
PF4P02776 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PF4P02776 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PF4P02776 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC15.29■□□□□ 0.04
PF4P02776 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
PF4P02776 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC15.29■□□□□ 0.04
PF4P02776 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PF4P02776 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PF4P02776 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PF4P02776 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
PF4P02776 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PF4P02776 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
PF4P02776 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PF4P02776 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PF4P02776 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PF4P02776 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
PF4P02776 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
PF4P02776 CALM3-202ENST00000391918 702 ntTSL 2 BASIC15.28■□□□□ 0.04
PF4P02776 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC15.28■□□□□ 0.04
PF4P02776 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
PF4P02776 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC15.28■□□□□ 0.04
PF4P02776 F2R-202ENST00000505600 442 ntTSL 2 BASIC15.28■□□□□ 0.04
PF4P02776 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC15.28■□□□□ 0.04
PF4P02776 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC15.28■□□□□ 0.04
PF4P02776 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC15.28■□□□□ 0.04
PF4P02776 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC15.28■□□□□ 0.04
PF4P02776 BCL2-203ENST00000589955 5011 ntBASIC15.28■□□□□ 0.04
PF4P02776 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC15.28■□□□□ 0.04
PF4P02776 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
PF4P02776 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
PF4P02776 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PF4P02776 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PF4P02776 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PF4P02776 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
PF4P02776 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC15.27■□□□□ 0.04
PF4P02776 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PF4P02776 EP400NL-214ENST00000641289 2402 ntBASIC15.27■□□□□ 0.04
PF4P02776 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
PF4P02776 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC15.27■□□□□ 0.04
PF4P02776 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
PF4P02776 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PF4P02776 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC15.27■□□□□ 0.04
PF4P02776 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PF4P02776 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC15.27■□□□□ 0.04
PF4P02776 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC15.27■□□□□ 0.04
PF4P02776 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
PF4P02776 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PF4P02776 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PF4P02776 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC15.27■□□□□ 0.04
PF4P02776 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC15.27■□□□□ 0.04
PF4P02776 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC15.27■□□□□ 0.04
PF4P02776 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC15.27■□□□□ 0.04
PF4P02776 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC15.27■□□□□ 0.04
PF4P02776 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
PF4P02776 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC15.27■□□□□ 0.03
PF4P02776 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC15.27■□□□□ 0.03
PF4P02776 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PF4P02776 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
PF4P02776 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
PF4P02776 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
PF4P02776 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PF4P02776 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
PF4P02776 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PF4P02776 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
PF4P02776 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
PF4P02776 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PF4P02776 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC15.26■□□□□ 0.03
PF4P02776 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC15.26■□□□□ 0.03
PF4P02776 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC15.26■□□□□ 0.03
PF4P02776 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PF4P02776 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
PF4P02776 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
PF4P02776 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PF4P02776 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC15.26■□□□□ 0.03
PF4P02776 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PF4P02776 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms